Xanthomonas euvesicatoria pv. vesicatoria: XCV4442
Help
Entry
XCV4442 CDS
T00288
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XCV4442 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcv03400
]
XCV4442 (recB)
Enzymes [BR:
xcv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XCV4442 (recB)
DNA repair and recombination proteins [BR:
xcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XCV4442 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAJ26173
UniProt:
Q3BM40
LinkDB
All DBs
Position
complement(5118681..5122733)
Genome browser
AA seq
1350 aa
AA seq
DB search
MSVSPVTDPYLQLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRIGQILAVTFTEAA
TQELRRRIRERLVLAASLVPEAPSPLAGAASAATESSAIQSPDAPSASAGAALGATDLAD
APSQPGPLLHEAPDVLLTRAILATHLGGGSETPVALRRRLQQAVEEIDLAAVFTIHGFCA
RVLREHALESGQAFAAPELLANDRQLLGEVAADLWRQRAADAVMAEDLIALWSGGPEALA
SDLRALVRHPTLLPAVATTTDDAPALLQAAHAAANALAAAFQTHGTAFFDAIMAAIEGGI
LSKVSYKPEWLASLWHWFETFAAAPALNTAPHAKLLKLTAAELAAGTNKKFVDRTPSSPM
SHQIDGYLTALARVEEWRSRRRIALLHALRDDAIARLALLKRQRRVQTYDDLVDGVAHAL
QGAQADALVKRLRTQYAIALVDEFQDTDDRQWSIFSNVFGEGPLARAAGLEPALFLIGDP
KQAIYGFRGGDVRTYLAAAVTAELAPPLSHNFRSRPGVLAAIDALYAQAGYADAFLTDGI
AFHPVRAGTKRVDEDLQRDGVTAPALTLWRAPEPPPPAKGKPKPWSAGRARELATAACVA
AIRGWLAGGRDGTATVCGRPVQAGDIAVLVRSHGEATRIQQALGAVGIPAVAAGKQSLFA
TEQALEVLALLQALLDPGDDSRLRAALATVLIGEDAIAIAALERDGERHRHWQQQALDWR
ERWQRGGPLALIGELGATHGQRLLALVDGERRLTNYLQLAELLQEADARALGPHGLVDWL
SRRIANADDNDEAQQLRLESDARRVQIVTLHKSKGLEYPLVFLPYIGIGRSDKGAGRHCV
VHAPDVGRQLHWKTERDDPSWSAAEAAWKQEQRAEDARLLYVGLTRAEHALWIASGPFHQ
HERTALSAMLRALDALQGAAGEGTVVVDTSTPPAHLPRLPAPIEAQVPPARSAQRHIAPE
WWVYSFTQLANADAGAATDPMASATVVGSGGSDEPSGSEAVAVAVASDAEPFDPRFAGNR
FGVVMHDVFERCDFAAWQAWRPSQPAPDGQAAPILQALQRGGYAQDDLDDGLRMLTALIG
HTLTVALPEGTRLADVPEPQRRNEMEFHFAMRPTRVDALLALLHRFGVVGDRQAFGARQR
LEGLMTGLIDLTYSVDGRWYVLDYKSNRLPSYDADALARAMAHSEYELQALIYTVALHRW
LRFRLGEAYDYARDFGGVRYLFCRGLDAGRPAEAAGSEAVAETPGHSIAGQRMSATARDS
TGDRPDSAPNAGATTTGDMRAPLGDPAPGIHAWRFEPALVLAVDALFAGKLADALSNDAP
AQGSRNGLEPLSPRERGWGEGTSAPGTPTP
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcagccccgtcaccgacccgtacctgcagttgccgctgcacggcgtgcgcctg
atcgaggccagcgccggcaccggcaagacctttacgctggccacgttgttcacccggctg
gtggtcgagcgtggcttgcgcatcggccagatccttgcggtgaccttcaccgaagcggcc
acgcaggagctgcgccgccgcattcgcgaacgcctggtgctggccgcaagcctggttccc
gaggcgccatcgcctctcgcaggagcggcttcggccgcgaccgagtcgtccgcaatccag
tcgcccgacgccccatcggcttctgcaggagcggccctgggcgcgaccgacctcgccgat
gccccgtcgcagccagggccgctcctccatgaagcgcccgacgtgttactcacccgcgcc
atcctcgccacccatctgggcggcggcagcgaaacgcccgtcgccttgcgtcgccgcctg
cagcaggcggtggaagaaatcgatctggccgcggtgttcaccatccacggcttttgcgcg
cgcgtgctgcgcgaacacgcactggaaagcggccaggcgttcgccgcgccggaactgctc
gccaacgatcgccaattgcttggcgaagtggcggccgatctgtggcggcagcgcgccgcc
gatgcggtgatggccgaagatctcatcgccctgtggtcgggcggccccgaggccttggcc
agcgatctgcgcgcgctggtgcggcacccgacgctgttgccggcagtcgccacaaccacc
gacgatgcacctgccttgctgcaggccgcgcacgcggcagccaacgcactggccgccgca
ttccagacgcacggcaccgcattcttcgacgccatcatggcggccatcgagggcggcatc
ctgagcaaggtcagctacaaacccgagtggctggcatcgctgtggcactggttcgaaacc
ttcgccgctgcgcctgcgctcaacaccgcgccgcatgccaagttgctcaagttgaccgcg
gcggaactggctgccggcaccaacaagaagttcgtcgatcgcacgccgtcttcgccgatg
agccaccagatcgatggctatctcactgcgctggcgcgcgtggaagaatggcgcagccgt
cgccgtatcgcattgctgcacgcgctgcgcgacgatgccatcgcacggctggcgctgctc
aagcggcaacgccgcgtgcagacctacgacgacctggtcgatggggtggcgcacgcattg
caaggcgcgcaggccgacgccttggtcaaacgcctgcgcacgcaatacgccatcgcgttg
gtggacgaattccaggacaccgacgaccgccagtggtcgatcttttccaacgtgttcggc
gaaggcccgctcgcacgagcagcagggctggaaccggcgctgtttctgatcggcgacccc
aagcaggccatctacggcttccgtggcggcgatgtgcgcacctatctggccgcggccgtc
accgccgaactggcgccgccgctgagccacaacttccgctcgcgccccggtgtgctggcg
gccatcgacgcgctgtacgcacaggccggctacgccgatgccttcctcaccgacggcatt
gccttccatccggtgcgggccgggaccaagcgcgtggatgaagacctgcaacgcgatggc
gtcactgcgccggcactgacgctgtggcgcgcgccggaaccgccgccgcctgcgaaaggt
aagcccaagccctggagcgccggccgcgcacgcgagctggccaccgccgcctgcgttgcc
gcgatccgcggctggttggccggcggccgcgacggcacggccacggtgtgcggccggccg
gtgcaggccggcgatatcgccgtgctggtgcgcagccacggcgaggccacgcgcatccag
caggcgctcggcgcggtgggcattccggcggtggccgccggcaagcaaagtctgttcgcc
accgaacaggcgctggaagtgctcgccttgctgcaggccttgctcgatccgggcgacgac
agccgcctgcgcgccgccttggccacggtgttgatcggcgaagacgccatcgccatcgcc
gcacttgaacgcgacggcgagcgtcaccgccactggcagcaacaggcgctggactggcgc
gaacgctggcagcgcggcggcccgctcgccctgatcggcgaactcggcgccacccacggg
caacgcctgcttgccctggttgatggcgaacgccgcctcaccaactatctgcaactggcc
gaactgctgcaggaagccgacgcgcgcgcactcggcccgcatggcctggtcgactggctg
tcgcggcgcatcgccaatgccgacgacaacgacgaagcccagcagttgcggctggaatcg
gacgcacgccgcgtgcagatcgtcaccctgcacaagagcaagggcctggaatatccgctg
gtgttcctgccgtatatcggcatcggccgcagcgacaagggcgccggccgtcattgcgtg
gtgcatgcgccggacgtgggccgccagttgcactggaagacagagcgcgacgacccgagc
tggagcgccgccgaagccgcctggaaacaggaacaacgtgccgaagacgcgcgcctgctg
tatgtcggcctgacccgcgccgagcacgcgctgtggatcgccagcggcccgttccatcag
cacgaacgcactgcgttgtcggccatgctgcgtgcgctcgatgcgctgcagggcgcggca
ggcgagggcaccgtggtggtggacaccagcacgccgccggcccacttgccgcggctgccg
gcgccgatcgaggcgcaggtgccgcccgcgcgcagcgcgcaacggcacatcgccccggaa
tggtgggtgtatagcttcacccaactggccaacgccgatgccggcgcggccaccgacccg
atggccagcgccaccgtcgtcggcagcggcggcagcgatgaaccgtccggcagcgaggcg
gttgccgtggccgttgccagcgacgccgagccgttcgatccgcgctttgccggcaaccgc
ttcggcgtggtgatgcacgatgtgttcgaacgttgcgacttcgccgcctggcaggcctgg
cggcccagtcaacccgcgcccgacggccaggccgcacccatcctccaggccctgcaacgc
ggcggctacgcccaggacgacctcgacgacggcctgcgcatgctcaccgcgctgatcggc
cacacgctcaccgtggccttgcccgaaggcacccgcctggccgacgtgcccgaaccgcag
cgccgcaacgaaatggaattccatttcgccatgcggcccacccgcgtcgatgcgttgctg
gccctgctgcatcggttcggcgtggtcggcgaccgccaggccttcggcgcgcgccagcgc
ctggaaggcctgatgaccggcctgatcgacctcacctacagcgtggacgggcgctggtat
gtgctggactacaaatccaaccgcctgcccagctacgacgccgacgccctggcgcgggcc
atggcgcacagcgagtacgaactgcaggcgctgatctacaccgtagcgttgcaccgctgg
ctgcgcttccgtctgggcgaggcctacgactacgcccgcgacttcggcggcgtgcgctat
ctgttctgtcgcggcctggatgccgggcgccctgcggaggctgccgggtcggaagccgtt
gccgaaacccctggccattccatcgcgggccagcgcatgtccgcaaccgcgcgcgattcc
acgggcgacagacccgattccgctccgaacgccggcgccaccaccaccggcgatatgcgc
gcgccgcttggcgatccggcaccgggcatccacgcctggcgcttcgaaccggcgctggtg
ctggccgtggacgccttgttcgccggcaagctcgcagatgcgctgtccaatgacgcgcca
gcgcaaggttcccgcaacggcctcgagcccctctccccccgggagaggggttggggcgag
ggtacgtccgcaccagggacccccacaccatga
DBGET
integrated database retrieval system
