Xanthomonas campestris pv. vesicatoria: XCV4444
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Entry
XCV4444 CDS
T00288
Name
(GenBank) putative hemagglutinin-related protein
Organism
xcv
Xanthomonas campestris pv. vesicatoria
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Calx-beta
Big_9
SprB
Cadherin_5
NtrZ
Motif
Other DBs
NCBI-ProteinID:
CAJ26175
UniProt:
Q3BM38
LinkDB
All DBs
Position
complement(5126497..5131305)
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AA seq
1602 aa
AA seq
DB search
MSTNCTNMAAGVRVVLRWPLVFALLLLSTLYSGKAAAAASQYCPTLNATVVQGGSVQIDV
TTCDGTGVDDIGVGWDGVQPPHGTLTVPNPSGAQGTQIVTYTHNGDSATSDTFPLEDGAG
DTITVNITITPSRTASIAVSPSAANEDSGTSLVYTVTLSQTNTSATTVNLTRSGTATSGT
DYSGAVTSVVVPANTASASFSVTPIADTAVETDETVIFSVANGTGYSTGSPSSATATIVN
DDFPSASIAVSPASVSEDGATNLLYTVTLNQPSPTALSIGFGVSGTATSGTDYAAVSSPL
VIAAGQTTGTITINPTADSTVEPDETVVISLNTGSGYTVGSPNSATGTILNDDQPALSIN
DVSVNEGNAGTTNATFTVSLSAPAGAGGVSFDIATADGTATAGVDYVASSLTGQTIPAGS
SSATFTVLVTGDTLAEPNETFFVNLSNVTGASVSDGQGLGTIVNDDAQPALSIDDVSVNE
GNSGTTTATFTVSLSAASGQTVTVNYATADGTATAGSDYVARSGTLSFAPGVTAQGVAVT
VNGDTAVEPNETFSVGLSGASNATIARATGTGTILNDDAVVTISPASLPAATAGSAYSQT
LSASGGTPGYSFVISAGTLPAGMTLNAAGVLSGTPTASGSFNFTVTATDSGAPTSGSRAY
TLTVAGANVILPATTLPAGTAGQAYSSAITPAAGGIAPYSYALTAGALPAGITLNSGSGA
LSGTTTSVGSFSFTVTATDSTSGTPSQGTRGYTLNIAAPTIAVAPSTVPTATRGTAYSQT
LTASGGTAAYTYAITSGALPAGITLASNGTLSGTATLEGTFNFTVQATDANSFTGTQAYS
LTVAGPNLVLPASTLPAGTAGQAYAAAVTPATGGTAPYSYAVTAGALPGGVGLDAATGGL
SGTPTVSGTFTFTLTVTDSTPSPAAQASRSYSLTINAATLVLGQPTLPAAVRGTAYNQVL
TASGGVAPYRYSIASGTLPAGLTLASDGTLSGTPTVQGTTSFTIAVADAGNASATQAYTF
TVNDAAPVAVADVAATMTDTAVTAAVTANDTGSITAIAIASAPTNGTSVVNGLEVVYTPN
AGFAGTDVLSYTASGAGGTSAAVTLTITVNVRPVAVSVTAAAVPGEAQQVDITRNATGGP
FVAAAVVAVLPASAGTATITRVGGTASAAAARASGLSPAAAAMAETPTFTLTFTPNPAFV
GQATVQFTLSNAFATSAPASVVFNIAPRRDPSVDAEVRGLIDAQSESTRRFARAQIDNFQ
RRLEATHRGGGSFTNAVSFQPTSHCRQAERGISAQPCSPDTQDVDNDFRDAPAATGTTGS
SAQTQGDLGLWVGGAIRSGSLNRQTNSNGVDFQTDGLSVGADYRVASSLAIGAGLGWGRD
DSDVGNNGSHSKATAYTMALYASFHPGKAFFFDTLVGYQLLSYDLRRFVTDDSSLAEGNR
DGKQWIASLSTGADLQRGTLQITPYARVDVARATLDGYVEAGVAPFALRYADMDVATTTG
NLGLRLEWRREVAWGRLTPQLRVEYQRDFQGRGDAILSYADLTGGPFYRTAQSAFDRNRL
MVGIGAALLTEQGLSTRLEYRGITDGDSNNDQTWMINLEKKY
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaattgcaccaatatggctgcaggcgtgcgcgtcgttttgcgttggccgctg
gtgttcgcgctgctgctgttgagtacgctgtattccggcaaggccgcagcagcggcgtcg
caatattgtccgacgttgaacgccactgtagttcagggtggctcggtgcagatcgacgtc
accacctgcgacggcactggcgtagacgacatcggcgttggctgggacggagtgcagcct
ccccacggcactctgaccgttcctaatccaagcggagcacagggaacgcagatcgtcaca
tacacgcataatggcgacagcgccaccagcgacacgtttccgctggaagacggcgctggc
gataccatcacagtcaatatcacgattaccccctcgcggaccgccagcatcgcggttagc
ccgtccgccgccaacgaggacagcggtacctccttggtctacacggtgacgctgagccag
accaatacctcggcgaccacggtcaacctgacccgcagcggcaccgcgaccagcggcacg
gactactccggcgctgtgaccagcgtggtggtgccggccaataccgcctcggccagcttc
agcgttaccccgatcgccgacaccgcggtggaaaccgacgaaacggtgatcttcagtgtc
gccaatggcaccggctattccaccggcagcccgtccagcgccaccgccaccatcgtcaac
gacgacttcccttccgcgagcatcgccgtctccccggccagcgtgtccgaggacggcgcc
accaatctcctctacacggtcaccctgaaccaaccgtcgcccaccgcgctgtccatcggc
tttggcgtgagcggcaccgcgacctcgggcaccgactatgcggccgtcagttcgccgctg
gtgatcgccgccggccagaccaccggcaccatcaccatcaatccgaccgccgacagcact
gtcgagcccgacgaaaccgtggtgatcagtctcaacaccggcagcggctacacggtcggt
tcgccgaacagcgccaccggcaccatcctcaacgacgaccagccggcgctgtcgatcaac
gatgtctcggtcaacgaaggcaatgccggcaccaccaacgccaccttcaccgtgtcgttg
agcgcgccggctggcgccggcggcgtcagcttcgatatcgccacggccgatggcaccgcc
actgcgggtgtggactatgtcgcctccagtctgaccgggcagaccatcccggccggcagc
agcagcgccacctttaccgtgctggtcaccggcgacacgctggccgagccgaacgaaacg
ttcttcgtcaacctcagcaatgtcaccggcgccagcgtgagtgacgggcagggcctgggc
acgatcgtcaacgacgatgcgcagccggcactgtcgatcgacgatgtgagcgtcaacgaa
ggcaacagcggcaccaccacggccaccttcacggtgagcctgagcgctgccagcggccag
acagtcacggtcaactacgccaccgccgacgggaccgccaccgccggcagcgactatgtc
gcgcgctccggcacgctgagcttcgcgccgggcgtgaccgcgcaaggcgtggccgtcacc
gtcaatggcgacaccgcggtcgagcccaacgaaaccttcagcgttggcctgtccggcgcc
agcaatgcgaccatcgcccgcgccaccggcaccggcaccatcctcaacgatgatgcggtg
gtgacgatctcgccggcgtcgctgcccgcagcaaccgcaggcagcgcgtacagccagacg
ctgagcgccagcggtggcacccccggctacagcttcgtgatcagtgccggtacgttgccg
gccggaatgaccctgaacgccgccggggtgctgtccggtacgccgactgccagcggcagc
ttcaacttcaccgtcaccgcaaccgacagcggggcaccgaccagcggcagccgcgcctat
accctgaccgtggccggcgccaacgtgatcttgccggccaccaccttgccggccggcacc
gcgggccaggcctattcgagtgcgatcactccggccgccggcggcattgcgccctacagc
tacgcgctcaccgccggcgcgttgcccgccggcatcacgctcaatagcggtagcggcgca
ttgagcggcaccaccaccagcgtgggcagcttcagcttcaccgtcactgcgaccgacagt
accagcggcacgccctcgcagggcacgcgcggatacacgttgaacatcgccgcgccgacg
attgcagtggcgccgtccacggttcccaccgcaacacgtggcaccgcctacagccagacg
ctgaccgccagcggcggcacggcggcctacacctacgcgatcacgagcggtgcattgccg
gccgggatcaccttggccagcaacggcaccttgtcgggcacggccacgctggagggtacg
ttcaacttcaccgtacaggccaccgatgccaacagcttcaccggcacgcaggcatacagc
ctgaccgtggctggcccgaacctggtgttgccggcgtcgaccttgccggcagggacggcc
gggcaggcctatgcggctgcggtcacgccggccaccggcggcactgcgccgtacagctat
gcagtcactgccggcgcgctgccgggtggcgtgggactggacgctgccaccggcggcctc
agcgggacgccgacggtgtcggggaccttcaccttcaccctgacggtcaccgacagcacg
cccagccccgccgcgcaggccagccggagctactcgctgaccatcaacgccgcaacgctg
gtgctggggcagcccaccttgccggcggccgtgcgtggcaccgcctacaaccaggtgctc
accgccagcggcggcgttgcgccgtaccgctacagcattgccagcggcacgttgccggct
ggattgacgctggccagcgacggcacgctgtcgggcacgccaacggtacagggcaccacg
tcgttcaccattgcggtggccgatgcgggcaatgccagcgccacgcaggcctacaccttc
acggtgaacgatgcggcgccggtggcggtggccgatgttgccgccaccatgaccgacacc
gccgtgaccgcagcggtcaccgccaacgacaccggcagcatcaccgcgatcgccattgcc
agcgcgcccaccaacggcacgtccgtggtcaacgggctggaagtggtctacacgccgaac
gccggctttgccggcaccgacgtgctgagctataccgccagcggcgcaggcggcacctcg
gcagcggtgacgctgaccatcacggtcaacgtgcggccggtggcggtgtcggtgactgcg
gcggcagtgccgggcgaagcgcaacaggtggacatcacccgtaacgccaccggcgggccg
ttcgtggcggctgcggtggttgcggtgttgccggcctcggccggtaccgccaccatcacc
cgcgtgggcggcaccgccagtgcggcggcggcgcgtgcctccggcctgtcgccggcggcc
gctgcaatggccgagacgccgacctttaccctgacctttacgcccaacccggccttcgtc
ggccaggccacggtgcagttcaccttgtccaacgcattcgccacctcggccccggccagt
gtggtgttcaacatcgcgccacggcgcgacccgagcgtggatgcggaagtgcgtggcctg
atcgatgcgcagtccgagtccacgcggcgttttgcgcgggcgcagatcgacaacttccag
cgccgtctggaggccacccatcgcggcggcggcagcttcaccaacgcagtgagcttccag
ccgacctcgcattgccgccaggccgagcgcggcatcagtgcgcagccgtgcagcccggac
acgcaggacgtcgacaacgacttccgcgatgcgcccgcggcgaccggcaccaccggcagc
agcgcgcagacgcagggtgacctgggcctgtgggtgggcggcgcaatccgctcgggcagc
ctgaaccgccagaccaacagcaacggcgtggatttccagaccgatgggttgagcgtgggt
gccgactaccgtgttgcctcgtcgctggcgatcggcgcgggcctgggttggggccgcgac
gacagcgatgtgggcaacaacggcagccacagcaaggccactgcctacacgatggcgttg
tacgccagcttccatccgggcaaggcgttcttcttcgacaccttggtcggctaccagctg
ctgtcttacgacctgcgccgcttcgtcaccgatgacagttcgctggccgagggcaaccgc
gacggcaagcagtggatcgcctcgctgtccactggtgccgacctgcaacgcggcacgctg
cagatcaccccgtacgcacgggtggatgtggcacgcgccaccttggacggctatgtagaa
gcaggcgtggccccgttcgcgctgcgctatgccgacatggatgtggccaccaccaccgga
aatctcggcctgcgtctggaatggcgtcgcgaggttgcctggggacggctgaccccgcag
ttgcgcgtggagtaccagcgcgacttccagggccgtggcgatgcgatcctgagctacgcc
gaccttaccggtggcccgttctatcgcaccgcgcagagcgcgttcgaccgcaaccggttg
atggtgggcatcggtgcagcgctgttgaccgaacaaggcctgtcgacgcggctggaatac
cgcggcatcaccgacggcgacagcaacaacgatcagacctggatgatcaatctggaaaag
aaatactga
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