Xanthomonas citri pv. citri MN10: J162_01465
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Entry
J162_01465 CDS
T03779
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xcw
Xanthomonas citri pv. citri MN10
Pathway
xcw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xcw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
J162_01465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcw03019
]
J162_01465
03009 Ribosome biogenesis [BR:
xcw03009
]
J162_01465
03036 Chromosome and associated proteins [BR:
xcw03036
]
J162_01465
Enzymes [BR:
xcw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
J162_01465
Messenger RNA biogenesis [BR:
xcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J162_01465
Ribosome biogenesis [BR:
xcw03009
]
Eukaryotic type
90S particles
RNase
J162_01465
Prokaryotic type
rRNA processing factors
J162_01465
Chromosome and associated proteins [BR:
xcw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
J162_01465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AJZ03613
UniProt:
A0A0U5FAF2
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All DBs
Position
1530552..1531232
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AA seq
226 aa
AA seq
DB search
MSNRTFQRGDPIGHAFADPALLAQALRHRSAGTPHNERLEFLGDGIVNLLIAEALYHRWP
KADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVA
AIYLDCGFERCRAVVLPWFEASLAALPVGKAEKDPKTRLQEWLQARQLPLPTYALISESG
DEHAKQFHVACILEQPVARAEGQGTSRRLAEQQAATLVIAQLDSNT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaatagaaccttccaacgcggtgatccgatcgggcacgcattcgccgatccggct
ctgctcgcccaggcgctgcggcatcgcagcgccgggacgccgcacaacgagcgactggaa
tttctcggcgacggcatcgtcaacctgctgatcgccgaggcgctgtatcaccggtggccc
aaggccgatgaaggcgcattgacccgtgcacgtgccgagctcgtacgcgaaggtgcgctg
gcagtcatcgggcgtacgctcaatttgggcgaacgtctcacgcttggcccaggcgagctg
aagtccggtggtcaccggcgcgattcgatcctggccgatgcggtcgaagcgatcgtcgct
gccatctacctggactgcggtttcgagcgttgccgtgcggtggtgctgccgtggttcgaa
gcctcgctggcggcattgccggtgggcaaggcagagaaggatcccaagacccggctgcag
gaatggctgcaggcgcgccagctgccgctgcccacttacgcgctgatcagcgagagcggc
gacgagcatgccaagcagttccacgtcgcctgcattctggagcagcccgttgcccgcgcc
gagggccagggcacctcgcgtcgcctcgcagagcaacaggcggcgactcttgtcatcgca
caactggattcaaacacgtga
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