Xanthomonas citri pv. citri MN10: J162_02080
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Entry
J162_02080 CDS
T03779
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
xcw
Xanthomonas citri pv. citri MN10
Pathway
xcw02020
Two-component system
xcw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J162_02080
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J162_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcw03021
]
J162_02080
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xcw02035
]
J162_02080
Transcription machinery [BR:
xcw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J162_02080
Bacterial motility proteins [BR:
xcw02035
]
Flagellar system
Flagellar assembly proteins
Stator
J162_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AJZ04219
UniProt:
A0A0U5FEL0
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All DBs
Position
complement(2247423..2248190)
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AA seq
255 aa
AA seq
DB search
MSTATATTASAQYRAVQRNNANDVVTQHADLVRRIAHHLAARLPASVEVDDLIQAGMIGL
IEASRSYDSEQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAAAVRKIEQNTG
RAAAATEVAAAMEMPLPDYLRLMEDAARGQVLSLESRIEDHGELDTTAKGGPNPQQMMER
GEFGRELGKAIGQLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVVRLRGR
LKVFELADAGVEIDD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgctaccgcaaccacggccagcgcccagtaccgcgccgtgcagcgcaacaac
gccaacgacgtggtgacccagcacgccgacctggtccgccgcatcgcccaccatctggca
gcgcgtctgccggccagcgtggaagtggacgacctgatccaggccggcatgatcggcctg
atcgaagcctcgcgcagctacgactccgaacagggcgcgtcgttcgaaacctatgcctcg
atccgcatccgcggctcgatgatcgacgagattcgcaggggcgactgggtgccgcgttcg
gtgcaccgccgcgcccgcgatgccgccgccgccgtgcgcaagatcgaacagaacaccggc
cgcgccgccgccgccaccgaagtggccgccgccatggaaatgccgctgcccgattacctg
cgcctgatggaagatgcggcacgtggccaggtgctgagcctggaatcgcgcatcgaagac
cacggcgagctggacaccaccgccaagggcggccccaatccgcagcagatgatggagcgt
ggcgaattcggccgcgagctgggcaaggccatcggccaactgcccgagcgcgagcaactg
gtgctgtcgctgtactacgaacaggaattgaacctgaaggaaatcggcgccgtgctgggc
gtcagcgaatcgcgcgtgtgccagatccacggccaggcggtggtgcgtttgcgtggccgc
ctcaaagtcttcgaactggccgatgccggtgtcgaaattgacgactaa
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