Xanthomonas citri pv. citri MN10: J162_02458
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Entry
J162_02458 CDS
T03779
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
xcw
Xanthomonas citri pv. citri MN10
Brite
KEGG Orthology (KO) [BR:
xcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcw03032
]
J162_02458
03036 Chromosome and associated proteins [BR:
xcw03036
]
J162_02458
03400 DNA repair and recombination proteins [BR:
xcw03400
]
J162_02458
DNA replication proteins [BR:
xcw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J162_02458
Chromosome and associated proteins [BR:
xcw03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
J162_02458
DNA repair and recombination proteins [BR:
xcw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J162_02458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CDC48_2
HU-CCDC81_euk_2
PTS-HPr
VWA_3
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AJZ04583
UniProt:
A0A0U5FEE7
LinkDB
All DBs
Position
complement(2676333..2676644)
Genome browser
AA seq
103 aa
AA seq
DB search
MTKSELIEILARRQAHLKSDDVDLAVKSLLEMMGQALSDGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVVPVDVADTAD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaattgattgaaatcctggcgcgacgccaagcgcatctgaagtcggac
gacgtagatctggcagtcaagtcgctgctggaaatgatggggcaggccctctccgacggt
gatcggatcgaaattcgcgggttcggcagtttttcgctgcattaccgtccgccacggttg
ggacgtaatcccaagaccggcgagtcggtcgcgctgccgggcaagcatgttccccacttc
aagccgggcaaggaattgcgtgagcgcgtgagctccgtggtgcctgtggatgtggccgat
acggcagactga
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integrated database retrieval system
