Xanthomonas cucurbitae: EBN15_00170
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Entry
EBN15_00170 CDS
T06553
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xcz
Xanthomonas cucurbitae
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcz03032
]
EBN15_00170
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_00170
Enzymes [BR:
xcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EBN15_00170
DNA replication proteins [BR:
xcz03032
]
Prokaryotic type
DNA Topoisomerases
EBN15_00170
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EBN15_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QHG85646
LinkDB
All DBs
Position
39420..40601
Genome browser
AA seq
393 aa
AA seq
DB search
MKAKRVLRKATVAASTAGKLATVAAGAAAATAAVATAAAVVQAKATARAAGLTYVNDQQP
GISRRRAGKSFSYRNADGQRIADADTLQRIRALAIPPAYTEVWICAKPNGHLQATGRDAR
RRKQYRYHAEWAQVRGEGKFERVIAFGTALPKLRRRLRRDLAVPGFPREKVLAIVVALLA
DTLVRVGNAEYARSNRSYGLTTLRNRHMEFLKGGRARLKFRGKSGQEHDIEVDDKQLVTL
IRQCQQLPGQSLFQYRDDAGQLQPVDSGEVNDYLREAMGEDFTAKDFRTWGGTLAALQRL
ARLPLPERSSERALKQVQNDVIREVADALGNTPSVCRKAYIDPCVFAGWRAGELQAMATG
VRGERQWEAATLKFLTASRAKRKTAAKCISKRK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaaacgcgttcttcgcaaggccaccgtcgcggccagcacggccggcaagctc
gccaccgttgccgcaggtgcagcggcggccacggcggccgtcgccactgccgccgccgtg
gttcaggccaaggccaccgcgcgtgcggccgggctgacctatgtcaacgaccagcagccc
ggcatcagccgccgccgcgccggcaagagcttcagctaccgcaatgcggatgggcaacgc
atcgccgatgccgacaccttgcagcgcatccgcgcgctggccattccaccggcctacacc
gaggtatggatctgcgccaagcccaatggccacctgcaggccaccgggcgcgatgcacgg
cggcgcaaacagtaccgctatcacgccgagtgggcgcaggtgcggggcgaaggcaagttc
gagcgggtgatcgcctttggcaccgcgctaccgaaactacgccgccgcctgcgccgcgat
ctggccgtgccaggctttccacgcgaaaaggtgctggccatcgtggtggcactgctggcc
gacacgctggtgcgcgtgggcaatgccgaatatgcgcgcagcaatcgctcctacgggctc
accacgctgcgcaaccggcacatggaatttctcaagggcgggcgcgcgcggctgaaattc
cgcggcaagagcgggcaggagcacgacatcgaagtggacgacaagcagctggtcacgctg
atccggcaatgccagcaactgccgggacaatcgctgttccagtatcgcgacgacgcaggc
cagctgcagccggtggattcgggcgaggtcaacgactacctgcgcgaggccatgggcgag
gacttcaccgccaaggatttccgcacctggggcggtacgttggctgcgttgcaacgcctg
gcccggctgccgttgcccgagcgcagcagcgaacgcgcgctcaagcaggtgcagaacgat
gtcatccgcgaggtggcagatgccctgggcaatacgccctcggtatgccgcaaggcctac
atcgacccctgcgtgttcgcaggctggcgcgccggcgaattgcaggccatggcgaccggc
gtgcgcggcgagcggcagtgggaagcggccacgttgaagttcctcactgcctcgcgtgcc
aagcgcaagacagcggcaaagtgcatttcgaaacgcaagtga
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