Xanthomonas cucurbitae: EBN15_00400
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Entry
EBN15_00400 CDS
T06553
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EBN15_00400 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_00400 (recD)
Enzymes [BR:
xcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EBN15_00400 (recD)
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EBN15_00400 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
Helicase_RecD
UvrD_C
AAA_22
AAA_16
T2SSE
nSTAND3
DEAD
AAA_28
Phageshock_PspD
SLFN-g3_helicase
ATPase
Rad17
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QHG85682
LinkDB
All DBs
Position
89767..91953
Genome browser
AA seq
728 aa
AA seq
DB search
MSHPPLLTALNQAGALRTLDLAFAQSLQRLAPDTDPLVLAGAALASLAVTSGHAGLDPAR
AAMLLDPRDGLPPTLPDPTDWQRALAASRWVAQPAPDQPAATDCPLVLEHGLLYLRRYRE
YERRLALGLRRIAAQPMPAFDPAALAPRFAQLFPNAATSSPLPPGEGARRAGEGTGLPEP
SIDRQAQAAALALRRALLLVTGGPGTGKTTTIARLLLLRIAQAQVAGHPPPRIALAAPTG
RAAERMAESLRLAVARAMEQGLPQHAAAQHSDASPLPPTAPTPDTSPLPPAGEDARRAGE
GNAPPAPHRDTALPTGASTLHRLLGVIPDSPQFRHTADNPLPFDLIVVDEASMIDLPLMC
KLVDAVADGTRLILLGDADQLPSVEAGDVLAAILQAAGPGDALQPDDAHALQPLLGSPPA
ASPPAAADTSPLTGHRVHLLRGYRQADDFALAPLADAIRAGDADTTLALLRSGELAGVHF
HEDGDDPLALGHDALLAHWRALADAHDPADALRAAGRLRLLTAVRTGPQGARGLNARIEQ
LLADTGAGTRRLGSGSPWFHGRLLLITENSYRHGLFNGDVGICLRSEANPLQGHAQGPLV
AWFAGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDTVWLQLPTRDARVLSRELLYT
GITRARQRLHLAGSEPVIRAALARHAARISGLAWRLGANDDKPTPSAAPTPAPAQPPPAS
APVQGALF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatccacccctgctcaccgccctcaaccaggccggcgccctgcgcacgctggac
ctggccttcgcacaaagcctgcagcgtctcgcccctgacaccgacccactggtcctggct
ggtgccgcgctcgcctcgctggccgtcaccagcggccatgccgggctggacccggcccgc
gccgcgatgctgctggacccgcgcgatggcctcccgcccaccttgccggatcccaccgac
tggcaacgcgcactcgccgcctcgcgctgggtcgcccagcccgcgcccgaccagcctgcc
gccaccgactgcccgctggtgctcgaacatggcctgctctacctgcgccgctaccgcgag
tacgaacgtcgcctggccctgggtctgcgccgcatcgccgcccaacccatgcccgcgttc
gaccccgccgcgctggcgccgcgcttcgcccagctgttccccaacgccgccacctcatcc
cctctccccccgggagagggtgcccgaagggcgggtgagggtacgggcctgcccgagcca
tccatcgaccgccaggcccaggccgccgcgctggcgctgcgccgcgcgctgctgctggtc
actggcggccccggcaccggcaagaccaccaccatcgcccgcctgctgctgctgcgcatc
gcccaggcgcaggtcgccggccatccaccgccccgcatcgccctggccgcccccaccggc
cgcgccgccgagcgcatggccgagagcctgcgcctggcggtggcccgcgccatggaacag
ggcctaccccagcacgctgccgcacagcactcagacgcctcccctctcccgcctaccgcg
ccgaccccggatacgtcccctctcccgcctgcgggagaggatgcccgcagggcgggtgag
ggcaacgccccccccgccccccaccgcgacaccgccctccccaccggcgccagcaccctg
catcgcctgctcggcgtcatccccgactccccgcagttccgccacaccgccgacaacccg
ctgccattcgacctgatcgtggtcgacgaggcctccatgatcgacctcccgttgatgtgc
aagctggtcgacgccgtcgccgacggcacccggctcatcctgctcggcgatgccgaccag
ctgccctcggtggaagccggcgacgtactcgccgccatcctgcaggccgccggccccggc
gatgcgctgcagccggacgacgcccacgccctgcaaccgctgctcggcagccccccagcc
gcctccccaccggccgccgccgacaccagccccctcactggccaccgcgtgcacctgctg
cgcggctaccgccaggcagacgatttcgcgctggccccactggccgacgccatccgtgca
ggtgatgccgacaccacgctcgccctgctgcgcagcggcgagttggccggcgtgcacttc
cacgaagacggcgacgacccgctggccctgggtcacgacgcactgctcgcccactggcgc
gcgctggccgacgcccacgacccggccgacgccctgcgcgccgccggtcgcctgcgcctg
ctcaccgccgtacgtaccggcccgcagggcgcgcgtggcctcaatgcgcgcatcgagcaa
ctgctggccgacaccggcgccggcacccgccgcctcggcagcggctcgccctggttccac
ggccgcctgttgctgattaccgaaaacagctatcgccacggcctgttcaatggcgacgtc
ggcatctgcctgcgcagcgaagccaaccccctgcaaggccatgcccaaggcccgttggtg
gcctggttcgcaggcgatggcgacggccaggtgcgcggcttccaccccgccgcactgccg
gcccacgagagcgccttcgccatgaccgtgcacaaggcgcagggcagcgaattcgacacc
gtctggctgcagctgcccacccgcgatgcccgcgtcctcagccgcgaactgctctacacc
gggatcacccgtgcccgccaacgcctgcacctggccggcagcgagccggtcatccgcgcg
gccctcgcacggcatgccgcgcgcatctctggcctggcgtggcgcttgggtgcgaacgat
gacaaaccgacgccgagtgctgcccccacgccagcgccagcccagccgccgcccgccagt
gcgccggtacaaggtgcgttgttctga
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