Xanthomonas cucurbitae: EBN15_02450
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Entry
EBN15_02450 CDS
T06553
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00521
Streptomycin biosynthesis
xcz00523
Polyketide sugar unit biosynthesis
xcz00525
Acarbose and validamycin biosynthesis
xcz00541
Biosynthesis of various nucleotide sugars
xcz01100
Metabolic pathways
xcz01110
Biosynthesis of secondary metabolites
xcz01250
Biosynthesis of nucleotide sugars
Module
xcz_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EBN15_02450 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EBN15_02450 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EBN15_02450 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EBN15_02450 (rfbB)
00525 Acarbose and validamycin biosynthesis
EBN15_02450 (rfbB)
Enzymes [BR:
xcz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EBN15_02450 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QHG86002
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All DBs
Position
586630..587685
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AA seq
351 aa
AA seq
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MTTWLVTGGAGFIGGNFVLEAVARGIRVVNLDALTYAGNLNTLAALDGNPDHVFVKGDIG
DRACVAGLLQEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDHWKTLPD
ARRAAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GEVGETYNVGGNSERQNIEVVQAICALLDQHRPRADGKPRASQITHVTDRPGHDRRYAID
ASKLKNALGWEPAFTFEQGIAQTVEWYLSNQAWVQGVLDGSYRLERIGAAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacttggcttgtaaccggcggtgccggtttcatcggtggcaattttgttcttgaa
gcggtggcccgcggaattcgcgtggtcaatctggacgcgctcacgtatgcggggaatctg
aacacgttggcggcgctggacggcaatccggatcacgtgttcgtcaagggcgatatcggc
gaccgtgcatgtgtcgccggcctgctgcaggagcatcagccggacgcagtgttgaacttc
gccgccgaaagccatgtggatcgttcgatcgatggccccggcgcgttcatccagaccaac
gtggtcggcacgctgggcttgctcgaggcggtgcgtgaccactggaagacgttgccggac
gcgcgccgcgcggcgttccgcttcctgcacgtgtccaccgacgaggtctacggcacgctt
ggggaaaccggtaaatttaccgaaaccacgccgtatgcccccaattcgccgtactcggcg
tccaaggcggcatccgatcatctggtgcgcgcgttccaccacacctacgggctgccggtg
ctgacgaccaattgctcgaacaactacggcccgtaccacttccccgaaaaactcattccg
ctggtgatcgccaaggcgctggccggcgagccgttgccggtctacggcgatggcaagcag
gtgcgcgactggttgttcgtcagcgaccactgcgaggcgatccgtaccgtgctggcgaag
ggcgaagtcggcgaaacctataacgtgggcggcaattccgaacgccagaacatcgaggtc
gtgcaggcgatctgcgcgctgctggaccagcaccgtccgcgcgcggatggcaaaccgcgc
gcgagccagatcacgcatgtcaccgaccgtcccggccacgatcgccgctatgcgatcgac
gcctccaagttgaagaacgcactcggttgggagccggcattcaccttcgagcagggcatc
gcgcagacggtcgagtggtatctgagcaaccaggcgtgggtccagggtgtgctggacggc
agctaccgcttggaacggatcggcgcggcagcttga
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