Xanthomonas cucurbitae: EBN15_02460
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Entry
EBN15_02460 CDS
T06553
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00521
Streptomycin biosynthesis
xcz00523
Polyketide sugar unit biosynthesis
xcz00541
Biosynthesis of various nucleotide sugars
xcz01100
Metabolic pathways
xcz01110
Biosynthesis of secondary metabolites
xcz01250
Biosynthesis of nucleotide sugars
Module
xcz_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EBN15_02460 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EBN15_02460 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EBN15_02460 (rfbC)
Enzymes [BR:
xcz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EBN15_02460 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
QHG86004
LinkDB
All DBs
Position
588629..589186
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AA seq
185 aa
AA seq
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MKVIATDLPGCMVIEPAVFGDERGVFFETWNAERFGGHGLPTHFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDIAVDIRRGSPHFGRWTAVLLSAKNRRQVWIPEGFAHGFA
VLSERALFSYLCTDIYVKEADASVRWDDATIGVDWPISNPLLSAKDANAPFLSDVPAERL
PVFVP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtgatcgcgaccgatctgccgggctgcatggtgatcgaaccggccgtgttcggt
gacgagcgtggcgttttcttcgaaacctggaatgcggagcgtttcggcggacatggcctg
ccgacgcacttcgtgcaaagcaacgtctccacgtccgccaagggcgtgttacgcgggctg
cattaccagtggccgcgtccccagggcaagctggtgagcgtgctggaaggcgaggtgtat
gacatcgcggtggacattcgtcgcggttcgccccatttcgggcgatggaccgcggtgctg
ctcagtgcgaaaaaccgtcggcaggtgtggattccggaaggcttcgcgcatggcttcgcg
gtgttgtcggaacgggcattgttcagctatctgtgcaccgacatctacgtcaaggaagcc
gatgcgagcgtgcgctgggatgacgcgacgatcggcgtcgattggccgatcagcaatccg
ttgctgtccgccaaggatgccaatgcaccgttcctgagcgatgtgccggccgagcgcctg
ccagtcttcgtgccgtga
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