Xanthomonas cucurbitae: EBN15_02560
Help
Entry
EBN15_02560 CDS
T06553
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00040
Pentose and glucuronate interconversions
xcz01100
Metabolic pathways
xcz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EBN15_02560
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EBN15_02560
Enzymes [BR:
xcz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EBN15_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QHG86021
LinkDB
All DBs
Position
609388..610521
Genome browser
AA seq
377 aa
AA seq
DB search
MKPKFSTAAAASLCVCALLLTGAASADPALEVATTGWATQNGGTKGGSKAAAANIYTVKN
AAELKSALKASVGSNGRIIKVSGIIDISEGKPYSTTSDMKSRARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNLTIENPWDPQPVWDADDGSAGNWNAEYDGLTVEGATNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGSMDVKKGANFVTVSYSAFKSHEKNSLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSHKVYPFSHAHGVGKESK
IFSENNAFDISGVSSCDKIAADYKGSVYRDQGSLLNGKSLSCSWNSSIGWKPPYTYNLLS
ANQVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattctcgacggcggccgccgcgtcgctgtgtgtctgtgcgttgctgctg
accggcgctgccagcgccgatccggcactggaagtggcgaccaccggctgggccacgcag
aacggtgggaccaagggcggctcgaaagcggcggccgccaacatctacacggtcaagaac
gcggcagaactgaaaagcgcgttgaaggccagcgtgggcagcaatgggcgcatcatcaag
gtcagcggcatcatcgatatcagcgagggcaagccgtacagcaccacctccgacatgaag
tcgcgtgcgaggctggacgttccgaccaagaccaccttgatcggcatcaccagcaatgcg
gaaatccgcgaaggctatttttacgtcaaggccaacgacgtcatcatccgcaatctcacc
atcgaaaatccgtgggacccgcagccggtttgggatgcggacgacggcagtgccggtaat
tggaacgccgaatacgacggcctgaccgtcgaaggcgccaccaacgtgtgggtggaccac
gtcacctttaccgatggccgccgtaccgacgaccagaatggcaccgccaatggtcgtccg
aagcagcaccatgacggctcaatggacgtcaagaagggcgccaacttcgtcaccgtttcc
tactcggcgttcaagtcgcatgagaagaattccctgatcggctccagcgacagcgcctcc
agcaccgacagcggcaagctcaaggtgaccatccacaacaccttgttcgagaacatctct
gcgcgcgcgccgcgcgttcgcttcggccaggtgcatctgtacaacaactatcacgtcggt
agcaccagccataaggtctatccgttctcgcacgcgcatggcgtgggcaaggaatcgaag
atcttctccgagaacaatgccttcgatatcagcggcgtgagcagctgcgacaagattgcc
gccgactacaagggcagcgtgtatcgcgaccagggctcgttgctcaacggcaagtcgctg
agctgctcgtggaacagcagcatcggttggaagccgccatatacctacaatctgctgtcg
gccaaccaggttgccgcagacgtcaaggccaaggccggcgccggcaagctgtaa
DBGET
integrated database retrieval system
