Xanthomonas cucurbitae: EBN15_04700
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Entry
EBN15_04700 CDS
T06553
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EBN15_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_04700
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EBN15_04700
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EBN15_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
UvrA_DNA-bind
nSTAND1
AAA_16
DnaJ_CXXCXGXG
AAA_29
AAA_25
Anti-TRAP
DUF4350
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QHG86394
LinkDB
All DBs
Position
1084728..1087256
Genome browser
AA seq
842 aa
AA seq
DB search
MSNATSASSGQVHVRGARVHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFGTLFAEAQRR
YLDSISPYARRLIDQVGVPEVDAIDGLPPAVALQQARGAPSTRSSVGSVTTLSNSLRMLY
SRAGHYPPGQQIIYADGFSPNTPAGACPTCHGLGRIYDATEATMVPDRSLSIRERAVAAW
PGAWHGQNQRDILTTLGHDVDLPWHKLPKKTRDWILFADEQPVVPVYAGYDLDEVKRALK
RKEAPSYMGTFTSARRYVLHTFATTQSAQMKKRVAQYLVSTQCPQCDGKRLRREALSVTF
AGLDIGELSRRPLDEVAELLRPAAEADLRMQGRKKGIADHPGQRIAAQRIAADLRARIAV
VQALGLGYLSLERSTPTLSPGELQRLRLATQIRSQLFGVVYVMDEPSAGLHPADAQALLG
ALDQLKAAGNSVFVVEHEVDVIRHADWIVDVGPAAGAHGGQVLYSGPPAGLETVEASSTR
RYLFGAPPQVPRHARQARDWLQLRGITRNNVRGLDVDLPLGVFTTVTGVSGSGKSSLISQ
ALVELLATHLGQSQSEDEQALDPLERGTQVPVEGAIVGGLDRVRRLVRVDQKPIGRTPRS
NLATYTGLFDPVRKLFAATPAARRRRYDPGQFSFNVVKGRCATCEGEGSVSVELLFMPSV
YAPCPTCHGARYNAKTLEIELRGHTIAQVLELTVDQAATFFADDASVLRPLQALREVGLG
YLRLGQPATELSGGEAQRIKLATELQRAQRRDTVYVLDEPTTGLHPADVDTLMTQLQGLV
EAGNTVIVVEHDMRVAASSDWVLDMGPGAGDAGGTVVVAGTPAQVAQQAHSRTAASLAEW
IG
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcaacatccgcttcctccggccaggtgcacgtgcgcggcgcgcgcgtgcac
aacctcaagaatgtggatgtggatattccacgcgatgcgctggtggtgttcaccggggtg
tccggctcgggcaagtcgtcgctggcgttcggtaccctctttgccgaagcgcagcggcgc
tacctggattcgatttcgccctatgcgcggcgcctgatcgaccaggtgggcgtgccggaa
gtggatgccatcgacgggctgccgccagcggtggccctgcagcaggcgcgcggtgcgcca
agcacgcgatcgtcggtgggcagcgtcaccaccctctccaattcgctgcgcatgctgtac
tcgcgtgccggccactatccgccggggcagcagatcatctatgcggacgggttctcgccg
aacacgccggccggtgcctgccctacctgccacggcctgggccgcatctacgacgcgacc
gaggcgaccatggtgccggaccgcagcctgagcatccgcgagcgcgcggtggcggcctgg
cccggtgcctggcacggccagaaccagcgcgacatcctcaccacgctgggccatgacgtg
gacctgccgtggcacaagctgccgaagaagacccgcgactggattctgttcgccgacgag
cagccggtggtgccggtgtatgccggctacgacctggacgaggtcaagcgcgcgctcaaa
cgcaaggaagcgccaagctacatgggcaccttcaccagtgcgcggcgttatgtgttgcac
acctttgccaccacccaaagcgcgcagatgaaaaagcgcgtggcgcagtacctggtgagc
acgcaatgcccgcaatgcgacggcaagcggctacggcgcgaagcgctgtcggtcaccttt
gccgggctggatatcggtgaattgtcgcggcgtccgctggacgaggtggccgagttgctg
cgcccggcggcagaggccgacctacgcatgcagggcaggaagaagggcattgccgatcat
ccgggacagcgcatcgccgcgcaacgcatcgcggcggatctgcgcgcgcgcatcgcggtg
gtgcaggcgcttggcctgggatatctcagcctggagcgcagcacgcccaccctgtcgccg
ggcgaactgcaacggctgcggctggccacgcagatccgctcgcagttgtttggcgtggtg
tatgtgatggacgagccatcggccggcctgcacccggccgatgcgcaggcgctgctgggc
gcgctggaccagctcaaggcggcgggcaattcggtcttcgtggtcgagcacgaagtggac
gtgatccgccacgccgactggatcgtggacgtgggcccggccgccggtgcgcatggcggg
caggtgctgtacagcggtccgcccgccgggctggagacggtggaagcatcgtccacgcgg
cgctatctgttcggtgcgccgccgcaggtgcctcgccatgcgcggcaggcccgtgactgg
ctgcagttgcgcggcatcacgcgcaacaacgtgcgtggcctggatgtggatctgccgctg
ggggtgttcaccaccgtcaccggcgtgtccggctcgggcaagtcgtcgttgattagccag
gcactggtggaactgctcgccacgcatctgggccaatcacagtcagaagacgagcaggcg
ctggatccgctggagcgcggcactcaggtgccggtggagggtgcgatcgttggcgggctg
gatcgggtgcgccggctggtacgcgtggaccaaaaaccgatcgggcgtacgccgcgctcc
aatctggcgacctacaccggcttgttcgacccggtccgcaaattgtttgcggccacgccc
gccgcgcgtcgccgccgctacgacccggggcagttctccttcaacgtcgtcaagggccgc
tgcgccacctgcgaaggcgagggctcggtgtcggtggagttgctgttcatgcccagcgtc
tacgcgccatgccccacctgccacggcgcgcgctataacgccaagacgctggagatcgaa
ctacgcggtcacaccattgcccaggtgctggagctgaccgtggaccaggccgcaacgttc
tttgccgacgatgccagcgtgctgcgaccgttgcaggcgctgcgcgaagtagggctgggc
tatctgcggctgggccagccggccaccgaactctccggcggcgaggcgcagcgcatcaag
ctggccactgagctgcaacgcgcccaacggcgcgacacggtctacgtactggacgagccc
accaccggcctgcatccggccgacgtggacaccttgatgacgcagttgcagggtctggtg
gaggcgggcaatacggtgatcgtggtcgaacacgatatgcgcgtggctgccagcagcgac
tgggtgctggacatgggcccgggtgcgggcgatgccggtggcacggtggtggttgccggt
acgccggcgcaggtggcgcaacaggcccacagccgtaccgctgcatctctagcagagtgg
atcggttag
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