Xanthomonas cucurbitae: EBN15_05730
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Entry
EBN15_05730 CDS
T06553
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xcz
Xanthomonas cucurbitae
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcz03016
]
EBN15_05730 (thpR)
Enzymes [BR:
xcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EBN15_05730 (thpR)
Transfer RNA biogenesis [BR:
xcz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EBN15_05730 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
QHG86568
UniProt:
A0A2S7DWB6
LinkDB
All DBs
Position
1333501..1334103
Genome browser
AA seq
200 aa
AA seq
DB search
MKQQFLYLSSAEAQLSLGLGEEKTTERLFFAVMADAQTAQRASDIANALLQAGQVDGKRL
GRERLHVTLHHLGDYAGGLPPSLVSRASQAAERIALPAFEVEFDRVGTFGGRRSQLPCVL
RGEEQVRGLYALQGALGRQLAHVGIAGDTQYTPHMTLLYCNQALPQRRCEALAWTVREFA
LVRSFLGQSRYQIEGRWPLH
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcagtttctctatctgtcatcggccgaggcgcagttatcgctgggcttgggc
gaagagaagaccaccgagcggctgttctttgcggtgatggcagatgcgcagaccgcgcaa
cgcgcgagcgacatcgccaacgcgctgctgcaggcagggcaggtggacggaaagcggctg
gggcgcgagcggctgcatgtaaccttgcatcacttaggcgattacgcgggcggattgccg
ccgtcgctggtcagccgcgccagccaggctgccgagcgcattgcgctgccggccttcgag
gtggagttcgaccgcgttggcaccttcggtgggcgccgctcgcaattgccgtgcgtgctg
cgcggcgaggagcaggtgcgcgggctgtacgcgttgcaaggtgcgctggggcgtcagttg
gcacacgtgggcattgccggcgatacgcagtacacgccgcacatgaccttgctgtattgc
aaccaggccctgccgcagagacgttgcgaagcactggcctggacggtgcgcgagtttgcg
ctggtgcgcagtttcctggggcagtcgcgctaccagatcgaagggcgctggccgctgcac
tga
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