Xanthomonas cucurbitae: EBN15_05895
Help
Entry
EBN15_05895 CDS
T06553
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03030
DNA replication
xcz03430
Mismatch repair
xcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EBN15_05895
03430 Mismatch repair
EBN15_05895
03440 Homologous recombination
EBN15_05895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcz03032
]
EBN15_05895
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_05895
Enzymes [BR:
xcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EBN15_05895
DNA replication proteins [BR:
xcz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EBN15_05895
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EBN15_05895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QHG86597
LinkDB
All DBs
Position
complement(1365581..1369186)
Genome browser
AA seq
1201 aa
AA seq
DB search
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDMPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVMIATPDMTPWRMTLLCRDRDGYLSLSRLLTRAWMEG
HRPEGGVAIHPEWLQAGHANLFALAGRDSLAGRLFNEGRADLAEQQLADWQRVFGDGLHL
ELTRTGREGEERFNQFALHAAGVRGLPVVASNDVRFLDASDFNAHEARVCISSGRVLDDP
KRPRDYSDQQHLKSSDEMAALFADVPDAIDNTQALAQRCNIEMRLGTYFLPAYPVPEDQT
LDTWIRSQSREGLAARLEKNPIAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDAGRVLGFTYGLVDSVAKLIPNILGIT
LKDAMGEGKDSEMASPDLIQRYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPEPLS
EFCPLFAEHDEDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIDPVDITAIPLDDAPTYKGVFASGSTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPDFNARKHGQQEIVYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGDYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVGAAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEA
ATPDTIQYGLGAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTAKLNRRTLEAMIHA
GAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSAPAMRLDLPESKEWP
LGQLLTGERETLGFYLSGHPFDPHREEVRELVGCDLGALEKILASQQRGGGGGGGGGGGG
DGEKRAWRPEVSAILAGQVIGVRRKGDSQVFVQLEDGRGRVECSAFSDAMAEFGHLLTRD
RILIVKGGLREDEFNGGYSLRIRQCWDYEQICAEHAQRLSLRLDLREKQAFPRIDALLAK
HRPGKTPLRLDLLLRTPSGGVAGMLDLNGSHSVRIDQQLMDSLRADPAVRTVKIKYSPPW
A
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgtccatctgcacgtccacaccgagttctcgctggcggattcc
accatccgcgtgcccgagaaaccggatcaggctgacccgaaaaaggccaaacaggccaat
ttgctgagccgggcggtcgaactcgacatgccggcgctggcggtcaccgatctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgagggcgtgggcatcaagcccatcgcc
ggcgccgacgtgatgatcgccacgccggacatgacgccctggcgcatgaccctgctgtgc
cgcgaccgcgacggctacctgagcctgtcgcggctgctcacgcgcgcctggatggaaggc
catcgccccgaaggcggcgtggcgatccatcccgagtggctgcaggccggccacgccaac
ctgtttgcgctggccggccgcgacagcctggccgggcgcctgttcaacgaaggccgtgcc
gaccttgccgagcagcagctggccgactggcagcgcgtgttcggcgatggcctgcatctg
gaactgacccgcaccgggcgcgagggcgaggaacgcttcaaccagttcgccctgcatgcg
gctggcgtgcgcgggctgccggtggtggccagcaacgacgtgcggtttctggatgccagc
gacttcaatgcgcacgaagcgcgcgtgtgcatttcctccggccgcgtgctggacgacccc
aagcgcccacgcgactacagcgaccagcagcacctgaaatccagcgacgagatggccgcg
ctgttcgccgatgtgcccgatgccatcgacaacacgcaggcgctggcgcagcgctgcaac
atcgaaatgcgcctgggcacctacttcctgcccgcctatccggtgccagaagaccagacc
ctggacacctggatccgcagccagtcgcgcgagggtctggccgcacgtctggaaaagaac
cccatcgcaccgggcaagacgcgccaggactatgtggaccggctcgaattcgaactggac
accatcatcaagatgggctttcccggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcattccgatcggcccggggcgcggttccggtgccggttcgctggtg
gcctgggcgctgcagatcaccgacctggacccgctgccgtacaacctgctgttcgagcgc
ttcctgaatccagagcgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgc
cgcgacgaagtcatcgactacgtggcgcgcaagtacggccgcgagcgcgtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgatgccgggcgcgtgctcggc
ttcacctacgggctggtcgacagcgtggccaagctgatccctaacatcctgggcatcacg
ctcaaggatgcgatgggcgaaggcaaggactcggagatggcctcgccggacctgatccag
cgctaccaggtcgaggacgacgtgcgcgacctgatggacctggcgcgccagctcgaagac
ctcacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgcccgagccattgagc
gagttctgcccgctgttcgccgaacacgacgaagacggccgcggcaagaatccggtcacc
cagttcgacaaggacgacgtcgaagccgtgggcctggtgaagttcgacttcctcggcctg
cgcacgctgaccatcatcgattgggcggtcaaggcgatcaacgtgcgccacgcgcgcgcc
ggcatcgacccggtggacatcaccgccatcccgctggacgacgcgcccacctacaaaggt
gtgttcgcctcgggcagcactggtgcggtgttccagttcgagtcctcgggcatgcgccgc
ctgctcaaggacgcacgcccggaccgcttcgaggacctgatcgcgctggtgtcgctgtac
cgccccggcccgatggacctgatcccggacttcaacgcgcgcaagcacggccagcaggag
atcgtgtatcccgatccgcgcaccgaagccatcctgaaagacacctacggcatcatggtg
taccaggagcaggtgatgcagatggcgcagatcgtcggcgattattcgctgggcggcgcc
gacctgttgcgtcgtgcgatgggcaagaaggtgccggccgaaatggccaagcaccgcgaa
atcttccgcgaaggtgcagccaagggcggcgtgggcgccgccaaggccgacgaaatcttc
gatttgatggagaaattcgccggctacggcttcaacaagtcgcacgctgccgcctacgcg
ctggtcagctaccagaccgcctggctgaaacggcattacccggccgaattcatggccgcg
acgctgtcctcggacatggacaacaccgacaaggtggtcggctttctcgatgaagtgcgc
aacctcggcctcaccgtcaagccaccgcgcgtcaacgaatcggcctacatgttcgaagcc
gccaccccggacacgatccagtatggcctgggcgcgatcaagggcgttggccagggcgcc
tgcgaggcgatcgtcgaagagcgccagcgtggcggcccctacactacgctgctggatttc
tgcacgcgcgtgggcaccgccaagctcaaccggcgcacgctggaagcgatgatccatgcc
ggcgcgatggatgggctgggcaagaaccgcgcctcgctgatgctgcagttgcccgaagtg
atgaaggccaccgagcagatggcgcgcgaacgcgcctcggggcagaactcgctgttcggc
gggccggacccaagcgcaccggcaatgcgcctggacctgcccgagagcaaggaatggccg
ctgggccagttgctcaccggcgagcgcgaaacgctgggcttctacctcagcgggcatccg
ttcgacccgcaccgcgaagaagtgcgcgagctggtcggctgcgacctgggcgcgctggaa
aagatcctggcttcccagcaacgtggtggcggtggcggtggcggtggtggaggtggcggc
gacggcgaaaaacgcgcctggcgcccggaagtcagcgcgatcctggccggccaggtgatc
ggcgtgcgccgcaagggcgacagccaggtattcgtgcaactggaagacggccgcgggcgg
gtggaatgcagtgcgttttccgatgcgatggccgaattcggccacctgctcacccgcgac
cgtatcctgatcgtcaagggcggcctgcgcgaagacgaattcaacggtggctacagcctg
cgcatccgccaatgctgggactacgagcagatctgcgccgagcatgcacagcggctgtcg
ctgcgcctggacctgcgcgagaagcaggccttcccccgcatcgacgcgctgctggccaag
caccgccccggcaagacccccctgcgcctggacctgctgctgcgcacccccagcggcggc
gtggccggcatgctcgacctcaacggcagccactcggtgcgcatcgaccaacagctgatg
gacagcctgcgcgccgacccggcggtgcgaacggtgaagatcaagtacagcccgccatgg
gcgtga
DBGET
integrated database retrieval system
