Xanthomonas cucurbitae: EBN15_06240
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Entry
EBN15_06240 CDS
T06553
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xcz
Xanthomonas cucurbitae
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_06240
Enzymes [BR:
xcz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EBN15_06240
DNA repair and recombination proteins [BR:
xcz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EBN15_06240
Prokaryotic type
EBN15_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QHG86651
LinkDB
All DBs
Position
1446850..1448268
Genome browser
AA seq
472 aa
AA seq
DB search
MSYAIVWFRRDLRLEDNPAMRAALDAGHHPIPLYIDAPHEEGEWMPGAASRSWRHRSLAA
LEAGLRALGSGLVIRAGNSAQVLDEVIAQTDAVAVYWNRKYEPATQPRDAQIKRGLRERG
IEVQSCNSALLFEPWQLSTQQGGPYKVFTPFWRNALTQLQLPDPVAAPRSLAPLPAKLKS
DALETLGLLPTLSWDQGFWEHWQPGEAGAHEMLEIFIDGALSGYRENRDRPDRVGTSQLS
PHLHFGEIAPWRIAAALNVQRNARNGAEIDGYIRQLGWRDFAYHLLHHFPETTNQNLNPR
FEGFDWAKADPVALQAWQRGRTGIPIVDAGMRQLWHTGWMHNRVRMIVASLLCKHLRMHW
VEGARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQAVYITRWV
PELGKLPVKERFAPWQHPLSLARLAPEYPRSPIIGLAEGRDAALAAYAKTRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgccatcgtctggttccgtcgcgacctgcgcctggaagacaatccggccatg
cgcgccgcgctcgatgccggccaccacccgatcccgctctatatcgatgcgccgcacgag
gaaggcgagtggatgccgggcgcggcctcgcgcagctggcggcatcgttcgctggccgcg
ctggaggcgggcttgcgcgcgctgggcagcggcctggtgattcgcgccggcaacagcgcg
caggtgctcgatgaggtgatcgcgcaaaccgacgcggtggcggtgtactggaatcgcaag
tacgaaccggccacccagccgcgcgatgcacagatcaaacgcggcctgcgcgagcgcggc
atcgaggtgcagagctgcaattcggcgctgttgttcgaaccctggcagctgagcacccag
cagggcggcccttacaaggtcttcactccgttctggcgcaacgcgctgacccaattgcaa
ttgcccgacccggtggcggcgccgcgcagcctggcgccgctgccggccaagctcaagagc
gacgcgctggagaccttggggctgctaccgacgctgagctgggaccagggtttctgggag
cattggcagccaggcgaggcgggcgcgcacgagatgctggagatcttcatcgacggcgcg
ctttccggctaccgcgaaaatcgcgaccggcccgatcgtgtcggcacctcgcaactgtcg
ccgcacctgcacttcggcgagatcgcgccgtggcggatcgccgctgcgttgaacgtacag
cgcaacgcgcgcaacggtgcggagatcgatggctatatccggcagctgggctggcgcgat
ttcgcctatcacctgctgcaccattttccggagaccaccaaccagaatctcaatccgcgc
ttcgaaggcttcgattgggccaaggccgatccggtggcgttgcaggcctggcaacgcggg
cgtaccggcattcccatcgtcgatgccggcatgcgccagctctggcacaccggctggatg
cacaaccgcgtgcgcatgatcgtggcgagtttgttgtgcaaacacctgcgcatgcactgg
gtcgaaggtgcgcgctggttctgggacacgctggtggatgcggatctggccaacaacacc
atgggatggcaatgggtggccggtaccggcgccgatgccgcgccgtatttccgcgtattc
aatccggtaacgcaggcggaaaagttcgatccgcaggcggtctacatcacgcgctgggta
ccggagcttggcaagttgccagtgaaggagcgctttgcgccatggcagcatccgctgtcg
ctggcacgcctggcaccggagtatccgcgttcgcccatcatcgggctggccgaagggcgc
gatgcagccctggcggcgtatgcgaaaacgcgcggctag
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