KEGG   Xanthomonas cucurbitae: EBN15_06455
Entry
EBN15_06455       CDS       T06553                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
xcz  Xanthomonas cucurbitae
Pathway
xcz00010  Glycolysis / Gluconeogenesis
xcz00020  Citrate cycle (TCA cycle)
xcz00260  Glycine, serine and threonine metabolism
xcz00280  Valine, leucine and isoleucine degradation
xcz00310  Lysine degradation
xcz00380  Tryptophan metabolism
xcz00620  Pyruvate metabolism
xcz00630  Glyoxylate and dicarboxylate metabolism
xcz00640  Propanoate metabolism
xcz00670  One carbon pool by folate
xcz00785  Lipoic acid metabolism
xcz01100  Metabolic pathways
xcz01110  Biosynthesis of secondary metabolites
xcz01120  Microbial metabolism in diverse environments
xcz01200  Carbon metabolism
xcz01210  2-Oxocarboxylic acid metabolism
xcz01240  Biosynthesis of cofactors
Module
xcz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xcz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xcz_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
xcz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
xcz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:xcz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    EBN15_06455 (lpdA)
   00020 Citrate cycle (TCA cycle)
    EBN15_06455 (lpdA)
   00620 Pyruvate metabolism
    EBN15_06455 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    EBN15_06455 (lpdA)
   00640 Propanoate metabolism
    EBN15_06455 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EBN15_06455 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    EBN15_06455 (lpdA)
   00310 Lysine degradation
    EBN15_06455 (lpdA)
   00380 Tryptophan metabolism
    EBN15_06455 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EBN15_06455 (lpdA)
   00670 One carbon pool by folate
    EBN15_06455 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xcz04147]
    EBN15_06455 (lpdA)
Enzymes [BR:xcz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     EBN15_06455 (lpdA)
Exosome [BR:xcz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   EBN15_06455 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C GIDA HI0933_like FAD_binding_2 FAD_binding_3 3HCDH_N FAD_oxidored NAD_binding_8 DAO 2-Hacid_dh_C Thi4 Lycopene_cycl UDPG_MGDP_dh_N Pyr_redox_3 Nairovirus_Gn
Other DBs
NCBI-ProteinID: QHG86688
LinkDB
Position
complement(1495565..1497001)
AA seq 478 aa
MSEQFDVVVIGAGPAGYHAAIRAAQLGMKVACIDAALGKDGKPALGGTCLRVGCIPSKAL
LDSSRQFWNMGHLFGDHGISFNDAKMDVPTMIGRKDKIVKQFTGGIAMLFKANKITPYYG
FGQLLPGNIVKVTQHEGGEIELKGTNVILAAGSESIELPFAKFDGDTIVDNVGGLDFTAV
PKRLAVIGAGVIGLELGSVWKRLGAEVTILEALPDFLALADAEVAKTALKEFKKQGLDIK
LGAKVGKTEITGSGDARQVVLNYTDAAGEQTLTVDKLLVAVGRKAATKNLLADGTGVKVT
DRGQIEVDGHCHTGVDGVWAIGDCVRGPMLAHKGFEEGIAVAELIAGLPGHVNFDTIPWV
IYTEPEIAWVGKTEQQLKAEGVAYKAGSFPFAAIGRAVAMGEPAGFVKVIADAETDRVLG
MHLVGVGVSELVHEGVLTMEFNGSADDLARICHAHPTLSEAIHDAAMAVSKRAIHKAN
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagcgaacaattcgacgtcgtcgtcatcggtgctggtccggccggttatcacgccgcc
atccgcgcggcccagctgggcatgaaggtcgcctgcatcgatgcggcactcggcaaggac
ggcaagcccgccctgggcggtacctgcctgcgcgtgggctgcattccgtccaaggcgctg
ctggattcctcgcgccagttctggaacatgggtcacctgttcggcgaccacggcatcagc
ttcaacgacgccaagatggacgtgcccaccatgatcggccgcaaggacaagatcgtgaag
cagttcaccggcggcatcgcgatgctgttcaaggccaacaagatcaccccgtactacggc
ttcggccagctgctgccgggcaatatcgtcaaggtcacccagcacgaaggcggcgagatc
gagctcaagggcaccaacgtgatcctggcggccggttcggaatcgatcgaactgccgttc
gccaagttcgatggcgacaccatcgtggacaacgtcggcggcctggatttcaccgccgtg
cccaagcgcctggcggtgatcggcgctggcgtgatcggcctggagctgggtagcgtgtgg
aagcgcctgggcgccgaggtcaccatcctcgaagcgctgccggacttcctggcgctggcc
gacgctgaagtggccaagaccgcgctgaaggaattcaagaagcagggcctggatatcaag
ctgggtgccaaggtcggcaagaccgagatcaccggcagcggcgatgccaggcaggtggtg
ctcaactacaccgacgccgccggcgagcagaccctgaccgtggacaagctgctggtggcc
gtgggccgcaaggccgccaccaagaacctgctggccgacggcaccggggtcaaggtcacc
gaccgtggtcagatcgaggtcgatggccattgccacactggcgtcgacggcgtgtgggcg
atcggcgactgcgtgcgcggcccgatgctggcgcacaagggcttcgaggaaggcatcgcg
gtggccgagctgatcgccggcctgcccggtcacgtcaacttcgacaccattccgtgggtc
atctacaccgagccggaaattgcctgggtcggcaagaccgagcagcagctcaaggccgaa
ggcgtggcctacaaggctggcagcttcccgtttgcggcaatcggccgcgcggtggccatg
ggcgagccggccggcttcgtcaaggtgatcgccgatgccgagaccgaccgcgtgctgggc
atgcacctggtgggcgtgggcgtctccgagctggtgcacgaaggcgtgctgacgatggaa
ttcaacggctcggccgacgacctggcacgtatctgccatgcgcacccgacgctgtccgaa
gccatccacgacgccgcgatggcggtgagcaagcgcgcgatccataaggctaactaa

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