Xanthomonas cucurbitae: EBN15_06455
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Entry
EBN15_06455 CDS
T06553
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00010
Glycolysis / Gluconeogenesis
xcz00020
Citrate cycle (TCA cycle)
xcz00260
Glycine, serine and threonine metabolism
xcz00280
Valine, leucine and isoleucine degradation
xcz00310
Lysine degradation
xcz00380
Tryptophan metabolism
xcz00620
Pyruvate metabolism
xcz00630
Glyoxylate and dicarboxylate metabolism
xcz00640
Propanoate metabolism
xcz00670
One carbon pool by folate
xcz00785
Lipoic acid metabolism
xcz01100
Metabolic pathways
xcz01110
Biosynthesis of secondary metabolites
xcz01120
Microbial metabolism in diverse environments
xcz01200
Carbon metabolism
xcz01210
2-Oxocarboxylic acid metabolism
xcz01240
Biosynthesis of cofactors
Module
xcz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xcz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xcz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
xcz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xcz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
EBN15_06455 (lpdA)
00020 Citrate cycle (TCA cycle)
EBN15_06455 (lpdA)
00620 Pyruvate metabolism
EBN15_06455 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
EBN15_06455 (lpdA)
00640 Propanoate metabolism
EBN15_06455 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EBN15_06455 (lpdA)
00280 Valine, leucine and isoleucine degradation
EBN15_06455 (lpdA)
00310 Lysine degradation
EBN15_06455 (lpdA)
00380 Tryptophan metabolism
EBN15_06455 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EBN15_06455 (lpdA)
00670 One carbon pool by folate
EBN15_06455 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcz04147
]
EBN15_06455 (lpdA)
Enzymes [BR:
xcz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
EBN15_06455 (lpdA)
Exosome [BR:
xcz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
EBN15_06455 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
GIDA
HI0933_like
FAD_binding_2
FAD_binding_3
3HCDH_N
FAD_oxidored
NAD_binding_8
DAO
2-Hacid_dh_C
Thi4
Lycopene_cycl
UDPG_MGDP_dh_N
Pyr_redox_3
Nairovirus_Gn
Motif
Other DBs
NCBI-ProteinID:
QHG86688
LinkDB
All DBs
Position
complement(1495565..1497001)
Genome browser
AA seq
478 aa
AA seq
DB search
MSEQFDVVVIGAGPAGYHAAIRAAQLGMKVACIDAALGKDGKPALGGTCLRVGCIPSKAL
LDSSRQFWNMGHLFGDHGISFNDAKMDVPTMIGRKDKIVKQFTGGIAMLFKANKITPYYG
FGQLLPGNIVKVTQHEGGEIELKGTNVILAAGSESIELPFAKFDGDTIVDNVGGLDFTAV
PKRLAVIGAGVIGLELGSVWKRLGAEVTILEALPDFLALADAEVAKTALKEFKKQGLDIK
LGAKVGKTEITGSGDARQVVLNYTDAAGEQTLTVDKLLVAVGRKAATKNLLADGTGVKVT
DRGQIEVDGHCHTGVDGVWAIGDCVRGPMLAHKGFEEGIAVAELIAGLPGHVNFDTIPWV
IYTEPEIAWVGKTEQQLKAEGVAYKAGSFPFAAIGRAVAMGEPAGFVKVIADAETDRVLG
MHLVGVGVSELVHEGVLTMEFNGSADDLARICHAHPTLSEAIHDAAMAVSKRAIHKAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaattcgacgtcgtcgtcatcggtgctggtccggccggttatcacgccgcc
atccgcgcggcccagctgggcatgaaggtcgcctgcatcgatgcggcactcggcaaggac
ggcaagcccgccctgggcggtacctgcctgcgcgtgggctgcattccgtccaaggcgctg
ctggattcctcgcgccagttctggaacatgggtcacctgttcggcgaccacggcatcagc
ttcaacgacgccaagatggacgtgcccaccatgatcggccgcaaggacaagatcgtgaag
cagttcaccggcggcatcgcgatgctgttcaaggccaacaagatcaccccgtactacggc
ttcggccagctgctgccgggcaatatcgtcaaggtcacccagcacgaaggcggcgagatc
gagctcaagggcaccaacgtgatcctggcggccggttcggaatcgatcgaactgccgttc
gccaagttcgatggcgacaccatcgtggacaacgtcggcggcctggatttcaccgccgtg
cccaagcgcctggcggtgatcggcgctggcgtgatcggcctggagctgggtagcgtgtgg
aagcgcctgggcgccgaggtcaccatcctcgaagcgctgccggacttcctggcgctggcc
gacgctgaagtggccaagaccgcgctgaaggaattcaagaagcagggcctggatatcaag
ctgggtgccaaggtcggcaagaccgagatcaccggcagcggcgatgccaggcaggtggtg
ctcaactacaccgacgccgccggcgagcagaccctgaccgtggacaagctgctggtggcc
gtgggccgcaaggccgccaccaagaacctgctggccgacggcaccggggtcaaggtcacc
gaccgtggtcagatcgaggtcgatggccattgccacactggcgtcgacggcgtgtgggcg
atcggcgactgcgtgcgcggcccgatgctggcgcacaagggcttcgaggaaggcatcgcg
gtggccgagctgatcgccggcctgcccggtcacgtcaacttcgacaccattccgtgggtc
atctacaccgagccggaaattgcctgggtcggcaagaccgagcagcagctcaaggccgaa
ggcgtggcctacaaggctggcagcttcccgtttgcggcaatcggccgcgcggtggccatg
ggcgagccggccggcttcgtcaaggtgatcgccgatgccgagaccgaccgcgtgctgggc
atgcacctggtgggcgtgggcgtctccgagctggtgcacgaaggcgtgctgacgatggaa
ttcaacggctcggccgacgacctggcacgtatctgccatgcgcacccgacgctgtccgaa
gccatccacgacgccgcgatggcggtgagcaagcgcgcgatccataaggctaactaa
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