Xanthomonas cucurbitae: EBN15_08160
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Entry
EBN15_08160 CDS
T06553
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz02020
Two-component system
xcz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EBN15_08160
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
EBN15_08160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xcz02035
]
EBN15_08160
Bacterial motility proteins [BR:
xcz02035
]
Flagellar system
Chemotaxis proteins
MCPs
EBN15_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP_2
HAMP_N3
Cache_3-Cache_2
HAMP
Laminin_II
DUF4971
Motif
Other DBs
NCBI-ProteinID:
QHG86973
LinkDB
All DBs
Position
complement(1902387..1904648)
Genome browser
AA seq
753 aa
AA seq
DB search
MTFKSSFAKTLANMPLKRKFLVQTALVAVGIVALAVVAARMQYVDLTDTRRDGLKSQVEM
AIAVVNGYAERAEKGQVDVAAAKQAALHTLSTMRARDGVDYIYVTDQAPVMLMHPTRPDL
NGKPLNDVLSPDGKRIFPAFVTAAQAGGGYVDYTWAKPGKQDPVSKTSYAALYKPWGWVI
GTGVYLDDTQSQALAFTAVVTLAGGLLVLVNLLVGWMIGNSVLEPVARALAAIKGVARGD
LSVRTADHGKDEIGQMLKATDDMVHTLERFSAQTKTMVHMHAGEDVTHRMPTDFPGVYGE
LAGGINTMIFEHLDAIVDAIGVLNEYAQGDLSRDAARLPGTRAVLHEAMDAAKASLLAIN
TEIKRLAQAAANGDFSQRGDATRFKHDSARMIGDLNAMMEVSDRNLGKLSELLTALAQGD
LTARMDGQFHGVFARMRDDANTTATQLAGIVGRIQQTATSITGSASEIAAGNNDLSQRTE
QQAANLEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGHVVSQVVDTMSGIQA
SSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKE
IKHLIDDSVSKVAQGSALVDQAGSTMSEIVSSVQRVTDIMSEISAASQEQSAGIEQVNLT
VTQMDEATQQNAALVEEATAAARSMEQQAQQLTEAVALFRLSAELGAVTRSTPAKARIAQ
KPATTAAPTAASKPLPRARVASVASNESDWSEF
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaagagttcgttcgcaaaaacgctcgccaacatgccgttgaagcgcaagttc
ctggtccagaccgcgctggtggcggtgggcatcgtcgccttggcggtggtggccgcgcgc
atgcaatacgtggatctcaccgacacccgccgcgacggcctcaagagccaggtcgaaatg
gcgatcgccgtggtcaacggctacgccgagcgcgccgaaaagggccaggtggacgtggcc
gccgccaagcaggccgcgttgcataccttgtccaccatgcgcgcacgcgatggcgtggac
tacatctacgtgaccgaccaggcgccggtgatgctgatgcatcccacccgcccggatctg
aatggcaagccgctcaacgatgtgctcagcccagacggcaagcgcatcttcccggcgttc
gtgaccgccgcgcaagccggtggtggctatgtcgattacacctgggccaagcccggcaag
caggatccggtcagcaagacctcctacgcggcgctgtacaagccgtggggctgggtgatc
ggcacgggcgtgtacctggacgacacccaatcgcaggcactggccttcaccgccgtggtg
acgctggccggcggcctgctggtgctggtcaatctgctggtcggctggatgatcggcaat
tcggtcctggaaccggtggcgcgtgccctggccgcgatcaagggcgtggcgcggggcgac
ctgagcgtgcgcaccgccgaccacggcaaggacgagatcggccagatgctcaaggccacc
gacgacatggtgcacacgctggagcgcttctccgcgcagaccaagacgatggtgcacatg
catgcgggcgaggatgtcacccaccgcatgcccactgatttcccgggtgtctacggcgag
ctggccggcggcatcaacaccatgatcttcgagcacctggatgccatcgtcgatgccatc
ggcgtgctcaacgagtatgcccagggcgacctgtcgcgcgatgccgcgcgccttccgggc
acccgtgccgtgctgcacgaagccatggacgcggccaaggccagcctgctggcgatcaac
acagagatcaagcgcctggcgcaggccgctgccaacggcgacttcagccagcgcggcgat
gccacgcgcttcaaacacgattcggcgcgcatgatcggcgacctcaacgcgatgatggaa
gtgagcgaccgcaacctgggtaagctctccgaactgctgacagcgctggcccaaggcgac
ctcacagcgcgcatggatggccagttccatggcgtgttcgcccgcatgcgcgacgatgcc
aacaccaccgccacgcagctggccggcatcgtcggacgcatccagcagacggccacctcc
atcaccgggtcggccagcgaaatcgccgccggcaacaacgatctgtcgcagcgcaccgaa
cagcaggccgccaacctggaagaaaccgccgcctcgatggaagagctcacctccaccgtc
aagcagaatgccgaaagtgcacgccaggccaaccagctggcgatcggcgcagccagcgtc
gcctcgcagggtgggcacgtggtcagccaggtagtggacaccatgtccggcatccaggcc
tcctcgaagaagatcgccgagatcatctccgtcatcgatggtatcgcgttccagaccaac
atcctggccttgaacgcggcggtggaagcggcgcgtgccggcgagcagggccgcggtttc
gccgtggttgcctccgaggtgcgcacgctcgcacagcgttcggccggtgcggccaaggag
atcaagcacctcatcgacgattcggtgagcaaggtggcgcagggctcggcgctggtggat
caggccggcagcaccatgagcgagatcgtgtcctcggtgcagcgcgtcaccgacatcatg
agcgagatctccgcggcgtcgcaggaacagtcggccggcatcgagcaggtcaacctcacc
gtgacccagatggacgaggccacccagcagaacgccgcgctggtggaagaagccaccgct
gccgcccgttcgatggaacaacaggcccagcaactgaccgaagcggtcgccttgttccgc
ctctcggccgagctgggagcagtcacacgcagcacgccagcgaaggcgcgcatcgcccag
aagccggcaacgaccgccgcgcccacagccgccagcaaaccgttaccgcgcgcccgggtg
gcctccgtggcgtccaacgaatcggactggtcggagttctag
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