Xanthomonas cucurbitae: EBN15_08725
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Entry
EBN15_08725 CDS
T06553
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBN15_08725 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcz03019
]
EBN15_08725 (pnp)
03016 Transfer RNA biogenesis [BR:
xcz03016
]
EBN15_08725 (pnp)
Enzymes [BR:
xcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EBN15_08725 (pnp)
Messenger RNA biogenesis [BR:
xcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EBN15_08725 (pnp)
Transfer RNA biogenesis [BR:
xcz03016
]
Prokaryotic type
tRNA degradation factors
EBN15_08725 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
DUF7680
KH_KhpA-B
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QHG87074
LinkDB
All DBs
Position
2031424..2033538
Genome browser
AA seq
704 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEVARQASGAVIVKMDDTVLLVTAVAAKTAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFNGPIGAAKVGYKNGEYILNPTITDLKDSQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHRELQKVINAINELTVEAGTKPSTWVAPAKNTA
LINALKEAVGTQLAGAFQVRDKLQRRDAISAIKKNVLESLAGRVASEGWNSAELSKEFGE
LEYHTMRDSVLDTKVRIDGRALDTVRPIAVQAGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPSLE
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEDDRFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALQQAKAGRLHILGEMSK
ALTTPRQELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIIIAS
VNAIAAQAAKSRIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
ERVGDKLKEGDLVRVKVLEVDKQGRIRLSIKAVEEGEGVQASAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctggagacgggc
gaagtcgctcgccaggcgagcggtgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgcaaaaaccgcgcgcgaagggcaggacttctttcccctgacggtc
gattaccaggagaagttctatgccggcggccgcatcccgggcggcttcttcaagcgcgaa
ggacgtgcgaccgagaaggagacgttgatctcgcgcctgatcgaccgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtgcagatcatcgccaccgtgatgtcgatgaac
ccggacatcgatggcgacatcgccgcgctgatcggcgcatcggctgcgctgtcgctggcc
ggtacccccttcaacggcccgatcggcgccgccaaggtgggctacaagaacggtgagtac
atcctcaacccgaccatcaccgacctgaaggattcgcagctggagctggtggtcgccggt
accgccaatgcggtgctgatggtggaatccgaagcggcgctgctgtcggaagaagtgatg
ctgggcgcggtcacctttggtcatcgcgaactgcagaaggtcatcaacgcgatcaacgaa
ctgaccgtcgaagccggcaccaagcccagcacctgggtggccccggccaagaacactgcg
ctgatcaacgcgctgaaggaagcggtcggcacccagctggccggcgccttccaggtgcgc
gacaagctgcagcgccgtgacgccatttctgccatcaagaaaaacgtgttggagtcgttg
gccggccgtgtggcctccgaaggctggaattccgctgagctgtcgaaggaattcggcgag
cttgaataccacaccatgcgcgactcggtgctggacactaaggtgcgtatcgacggccgt
gcactggacaccgtgcgcccgattgcggtgcaggccggcgtgctgccgcgtacccacggc
tcggcgctgttcacccgcggcgagacgcaggcgatcgtggtcaccacgctgggcactgcc
cgcgacggccaggtgatcgacgcggtcagcggcgagtacaaggaaaacttcctgttccat
tacaacttccctccgtattcggtgggcgagtgcggtcgcttcggtgcgccgaaacgtcgc
gaaatcggtcacggccgcctggccaagcgcggcgtgctggcggtgatgccgagcctggaa
gaattcccgtacaccatccgcgtggtctcggaaatcaccgagtccaacggttcgtcgtcg
atggcctcggtgtgcggctcctcgctggcactgatggacgccggcgtgccggtcaaggca
ccggtggcaggaatcgccatgggcctggtgaaggaagacgaccgcttcgtggtgctgtcg
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtactgcc
gaaggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aaacaggcattgcagcaggccaaggccggccgtctgcacatcctgggcgagatgtccaag
gcgctgaccaccccgcgtcaggagctgagcgactacgcgccgcgtctgctgaccatcaag
atccacccggacaagatccgcgaagtgatcggcaagggcggctcgaccattcaggccatc
accaaggaaaccggtacgcagatcgacatccaggacgatggcacgatcatcatcgcctcg
gtcaacgccatcgctgcgcaggcggccaagtcgcgcatcgagcagatcacctcggacgtg
gagccgggccgcatctatgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtg
accatcctgccgggcaaggacggcctggtgcacgtctcgcagatttccagcgagcgcgtg
gagcgggtcggcgacaagctgaaggaaggcgatctggtccgcgtcaaggtgctggaagtg
gacaagcagggtcgtatccgtctgtcgatcaaggcagtggaagagggcgaaggcgtgcag
gcctcggccgagtaa
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