Xanthomonas cucurbitae: EBN15_09095
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Entry
EBN15_09095 CDS
T06553
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EBN15_09095 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_09095 (uvrB)
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EBN15_09095 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EBN15_09095 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
QHG87136
LinkDB
All DBs
Position
2094766..2096787
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFELVSPYSPAGDQPAAIEKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVVDVFPAESDTEALRIELFDGDVEQLTLFDPLTGEALRKLQR
YTVYPKTHYATTRERTLSAVDTIKDELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYEMRESAGEITELVVRPTGLID
PVVEIRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKITRSMQAAIDETDRRREKQVEYNLEHGITPKSVARPISDIMEGA
REDAAEKKAGKGRSKSRQVAENAPDYRSMKPAEIAAKLKSLEQQMYQHAKDLEFEAAAQI
RDQLQKLKAASLV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgctttgagctcgtatccccgtactctccagccggcgaccagcccgccgcc
atcgagaagctggtggccaacttcgaagctggtctggccaagcagacgctgctgggggtg
acggggtcgggcaagacctacaccattgccaatgtcgtgcagcaggtgcagaagccgacc
ctggtgatggcgcccaacaagaccctggcggcgcagctgtatggcgagttcaagtcgttc
ttcccgaacaatgcggtcgaatacttcgtcagctactacgactactaccagcccgaggcc
tacgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgaacacatcgag
cagatgcgtctgtcggcgaccaagaccttattgtcgcgtcgcgattcgctggtggttgcc
accgtctcggcgatctacggcctgggtgcaccggaagattacctgtcgctgcgcctgatc
ctgtcgatcggcgagcatatcgatcagcgccagttgatccggcacctcaccgacctgcag
tacacgcgcaatgagttcgagcttacccgcggtgcgtttcgcgtgcgcggggaggtggtg
gacgtgtttccggccgagtccgataccgaggcattgcggatcgagctgttcgatggtgac
gtcgaacagctcaccttgttcgatccactgaccggcgaggccttgcgcaagctgcagcgc
tacaccgtgtacccgaagacgcattacgcgaccacgcgtgagcgcacgttgagcgcagtg
gacaccatcaaggatgaattgaaagagcgcctggagcagctgtattcgcaaaataagctg
gtggaagcgcagcgcctggcacagcgcacccagttcgacctggagatgatggccgaagtg
ggcttctgcaacggcatcgagaactactcgcggcatctcaccggcaaggcgcctggcgag
ccgccaccgacgttgttcgactacctgccgccggacgcgttgctggtcatcgacgaatcc
cacgtcaccattccgcagatcggcgcgatgtacaagggcgatcgctcgcgcaaggagacg
ctggtggagttcggcttccggctgccgtcggcactggacaaccggccgctgcgcttcgaa
gagtgggaggcgcgttcgccgcgcagcatctatgtctctgcgacgccgggtccatacgag
atgcgcgaatctgcaggcgagatcaccgagctggtggtgcgccccaccggcttgatcgat
ccggtggtcgagatccgcccggtcggtacccaggtcgacgacctgatgtccgaggtgcac
gaacgcatcaagctgggcgaccgtgtgctggtcaccacgctgaccaagcgcatggccgag
aatctcaccgagtacctcggcgagcacggcatccgcgtgcgctacctgcactcggacatc
gacaccgtcgagcgggtagagatcatccgcgatctgcgcctgggcaagttcgatgtgctg
gtcggcatcaatctgttgcgcgaaggcctggacatgccggaagtgtcgctggtggcgatc
ctggatgcggacaaggagggcttcctgcgctcgaccggctcgctgatccagaccatcggc
cgcgccgcacgcaatctgcgcggcaaggcgatcctgtacgcggacaagatcacacgctcg
atgcaggccgcgatcgacgagaccgaccgccgtcgcgagaagcaggtcgaatacaacctc
gaacatggcatcacacccaagtccgtggcgcgtccgatctccgacatcatggagggcgcg
cgcgaggatgcggcagagaagaaggccggcaaggggcggtcgaaatcgcgtcaggtggcc
gagaatgcgcccgactaccgcagcatgaagccggcggagatcgccgccaagctcaagagc
ctggagcaacagatgtaccagcatgccaaggatctggaattcgaggcggccgcgcagatc
cgcgatcaactccagaaattgaaggctgccagcttggtctag
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