Xanthomonas cucurbitae: EBN15_10945
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Entry
EBN15_10945 CDS
T06553
Name
(GenBank) mechanosensitive ion channel family protein
KO
K03442
small conductance mechanosensitive channel
Organism
xcz
Xanthomonas cucurbitae
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcz02000
]
EBN15_10945
Transporters [BR:
xcz02000
]
Other transporters
Pores ion channels [TC:
1
]
EBN15_10945
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
INO80E
Motif
Other DBs
NCBI-ProteinID:
QHG87386
LinkDB
All DBs
Position
complement(2532121..2533089)
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AA seq
322 aa
AA seq
DB search
MGVLGAMMAAAAGAAAATTKTVVVAPQAPTGWDKVDWAQILLDWGVALVILVVGMWLAKQ
LSQWLHRALTRARVEITLTNFLRNVAYALLLVLVFVSTLSKIGVPPTSLIAVLGAAGLAV
GLALKDSLSNIAAGVMLIVLRPMRDGDHVVIAGQEGIVDEIRIFQTRLRAFDDRMITLPN
STISTAPIINYSTLPNRRLDVTVGVGYDDDLKKAQQLLLQIAKDNPHVLDSPAPFVQVTN
LGESTVDLMLFAYSTNADFGAAKSTTLEQIRHQLLENGLHIPYPQRDLHVYHHDADGKPI
SDLLIKGITDDGDLAKGPSLAR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgttgggtgcaatgatggccgccgctgcgggagcagcggcggccacgaccaag
accgtggtggtcgccccccaggcgcccactggctgggacaaggtggactgggcgcaaatc
ctgctggactggggggttgcgctggtcatcctggtggtgggcatgtggctggccaagcag
ctcagccagtggctgcatcgtgcactgacgcgcgcccgtgtcgaaatcacgctgaccaac
ttcctgcgcaacgtcgcgtacgcgttactgctggtactggtatttgtcagcaccctcagc
aagatcggcgtaccgccgacgtcgttgatcgcggtactgggcgcggcaggtctggcggtc
ggcctggcgttgaaggactcgctgtccaacatcgctgccggggtcatgctgatcgtgttg
cggccgatgcgcgatggcgaccatgtggtgattgccgggcaggaaggcattgtcgatgag
atccggatcttccagacccggctgcgggccttcgacgatcgcatgattaccctgcccaac
agcaccatttccacggcgcccatcatcaactacagcaccctgcccaaccgccggctggac
gtgacggtgggcgtgggctacgacgacgacctgaagaaagcccagcagttgttgctgcag
attgccaaggacaaccctcacgtactggactcgcccgcgccattcgtgcaggtgaccaat
ctgggcgagagcacggtcgacctgatgctgttcgcctattccaccaatgcggacttcggc
gcggccaagagcaccacgctggagcagattcgccatcagttgctggagaacgggctgcat
atcccctatccgcagcgcgacctgcacgtgtatcaccacgatgccgacggcaagccgatc
tccgatctgctgatcaaaggcatcaccgacgatggcgacctcgccaaggggccatcgctg
gcacggtga
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