Xanthomonas cucurbitae: EBN15_11035
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Entry
EBN15_11035 CDS
T06553
Name
(GenBank) PAS domain S-box protein
Organism
xcz
Xanthomonas cucurbitae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_3
HATPase_c
GAF
GAF_2
PAS
PAS_9
Response_reg
PAS_8
HisKA
GAF_3
HATPase_c_2
MctB
HATPase_c_3
DUF4123
PAS_11
DUF7528
Motif
Other DBs
NCBI-ProteinID:
QHG89095
LinkDB
All DBs
Position
2548367..2551750
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AA seq
1127 aa
AA seq
DB search
MPPACADSTVDRAEVAATSRARALAQSPAFMAVLRGPDYVIERINQRFRDMVGERPLLGR
PLLEAIPEIIDQGYPDLLDEVWRSGQPFIGESMKAYLRRTPGSALEEAIVDFLYQPMRDS
DGRIAAILLHGFDVTAQRRIESRDSFLLALEDALQHVSDPGLIVDASMRLLADHLQASRC
AFGLAAADGSSMHVIGDQAQDVSGAQGDFPLEAVHGLRDALLENRPWVSTDLLAPGAPAS
MLEQYRRSGLRASLAIPLHKHGRLVAAVGVHQRTPRHWLSTDIELVRLVAARCWESMQRA
RAQQQLAASEARLRRLADTLPQIIFIAGPDGQPHYFNQRWYEYTGLDPAASTADAWQQAH
TAHGLQRSVQTWRQALQHERAYEVECELHGRDGQARWHLARALPVRGDDGGISEWIGTYT
DIHDRRAVEQQLRESEIRFRALCETVPAMIWMADAQGDCVYWNPRWYHFTGQGEDQALEQ
GWWDVVHPDDAVRVRQTFAQALEQRGEFVAEYRVRRHDGQYRWCIDHASPHCASDGRFLG
HIGSLTDISERKLVEDATASDRAILSLITTGAPLRVVLDAIAQSVEARGEIALYCSVMVR
DEVRHSLRFGSAVHFPHAHPGPFDAVPIAADGPPCARSAHLGRQVICADIQADPGFSRQH
AISTTLGIAACCVTPILASNGQVLGTLNIYYDRPHLSSLREQAMARSASHLAGIVIERAR
VDAKLKQSLQAETAARNQAEHANRVKDEFLATLSHELRTPLNAILGWSRLMQSQAMESTK
LGNGLAIIERSARGQTQIIDDLLDMSAILSGKLRLHAEHFDIANLARSAVELMQPAALAR
EITLELDAPAGCELWFFGDAGRLQQVLTNLLSNALKFTAAGGSVRVVLDVEDGGLRLCVH
DTGIGIAPDFLPHVFDRFRQADAGTTRRVGGLGLGLSISRQLVDLHGGSLGASSAGEGQG
SVFTVVLPFQHGVTDLRPASATPAAPGASSADCHDRLRGVRILLVDDDQDSRDAVLHFLQ
QAGAQVQAAGTVDLAERHLADACFDVLVSDIAMPQRDGYDLIRSLRGGLAPLHRHLPAIA
LTAYVRDEDRDRAVIAGFDAHMGKPVDPPGLVDLIERLLATGRALPV
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgcccccggcgtgcgctgacagcaccgtcgatcgtgccgaggtggccgcgacctcgcgg
gcgagggcgctggcgcaatctcccgcgttcatggccgtgctgcgcggccccgactatgtc
atcgaacgcatcaaccagcgctttcgcgacatggtcggtgaacggccgctgctggggcgg
cccttgctggaggcgattccggagatcatcgatcaaggttatccggacctgctcgacgag
gtgtggcgcagcggccaacccttcattggcgaatcgatgaaggcctacctgcggcgtacg
cctggcagtgcgctcgaagaagccatcgtggatttcctgtaccaaccgatgcgagacagc
gatggccgcatcgctgcgatcctgttgcacggcttcgacgtgaccgcgcagcggcgcatc
gaaagccgtgacagcttcctgctggcacttgaagatgcgttgcagcacgtctccgatcct
ggcctgatcgtcgatgccagcatgcgtctgctggcagaccatctgcaggccagccgctgc
gcattcgggctggccgccgccgacggcagcagcatgcatgtgatcggcgaccaggcgcag
gacgtgtcgggcgcgcaaggtgactttccgttggaggcggtgcacggcctgcgcgatgcg
ctgctggaaaaccgtccctgggtctccaccgacttgctggcgccgggtgcgccggcgtcc
atgctcgaacagtaccggcgctccggtctgcgcgcatcgctggcgattccgttgcacaag
cacgggcggctggtcgcggccgtcggcgtccaccagcgcacgccacggcactggctgtcc
accgacatcgaactggtgcgactggtcgctgcgcgttgctgggaatcgatgcagcgcgcc
agggcacaacagcagctggccgcgagcgaggcgcgcctgcgtcggttggccgacacgctg
ccgcagatcatcttcatcgccgggccggatgggcagccgcattatttcaatcagcgctgg
tacgagtacaccggcctggatccggcggccagcacggcggatgcgtggcagcaggcgcat
accgcccatggcctgcaacggtcggtgcagacatggcggcaggccttgcagcatgagcgc
gcgtacgaggtcgaatgtgaattgcacggccgcgacggccaggcgcgctggcatctggca
cgcgccctgccggtacgtggcgacgacggcggcatcagcgagtggatcggcacctacacc
gacatccacgaccgtcgcgccgtcgaacagcaactgcgtgaaagcgagatccgtttccgc
gcgctgtgcgagaccgtgccggcgatgatctggatggccgacgcgcaaggcgattgcgtg
tactggaatccacggtggtaccacttcaccggccagggcgaggaccaggcattggagcag
gggtggtgggatgtggtccacccggacgatgccgtgcgggtgcgccagacatttgcccag
gcgctggagcaacgtggcgaattcgtcgccgagtatcgggtgcgccgtcacgacgggcag
tatcggtggtgcatcgaccacgcatcgccgcattgcgccagcgacggtcggtttctcggc
cacatcggctcgctgaccgacatctccgagcgcaagcttgtcgaagacgccacggcgtcc
gaccgcgcgatcctgagcctgattaccaccggcgcgccgctgcgggtggtgctggatgcc
attgcgcagagcgtggaggcgcgcggcgagattgcgctgtactgctcggtgatggtgcgc
gacgaggttcgccacagcttgcggttcgggtcggccgtgcattttccgcacgcgcatcct
ggcccgttcgatgcagtgccgattgctgcggatgggccgccctgcgcgcgctcggcgcat
ctgggccggcaagtcatctgcgccgacatccaggccgaccccggcttcagccgccagcat
gcgatttccacaacgctggggatcgctgcgtgttgcgtcacgccgattttggccagcaac
ggccaggtgctgggcaccctcaacatctattacgaccgcccccatctgtcctcgctgcgc
gagcaggccatggcccgctcggcatcgcacctggccggcatcgtcatcgagcgcgcccgc
gtggacgccaagctcaagcaatcgttgcaggcggagaccgccgcccgtaatcaggccgag
catgccaaccgggtcaaggacgagttcctggctacgctcagccacgaattgcgcacgccg
ctcaacgcaatcctggggtggtcgcggctgatgcagtcgcaggcgatggaatcgaccaag
ctgggcaatggcctggccatcatcgagcgcagtgcgcgcgggcagacccagatcatcgac
gacctgctggacatgagtgccatcctctcgggcaagctgcgcctgcatgccgagcatttc
gacatcgccaacctggcacgcagtgcggtggagctgatgcagccggccgcgctggcgcgc
gagatcacgctggagctggatgcgccggccggctgcgaactgtggttcttcggcgatgcc
gggcggctgcaacaggtgctgaccaacctgctcagcaacgcgctcaaattcaccgctgcc
ggtggctcggtgcgggtggtactcgatgtcgaggacggcgggctgcggctgtgcgtgcac
gacaccggcatcggcatcgcgcccgatttcctgccgcatgtcttcgatcgctttcggcaa
gccgacgccggcaccacgcgccgtgtcggcggactgggattgggtttgtcgatctcgcga
caactggtggacctgcatggcggcagcctgggtgcgtccagtgcgggcgaaggccagggc
tcggtctttacggtcgtgctgccattccagcatggcgtcaccgatctgcgcccggcctcg
gcaacaccggcggcgcccggcgcgtcgtcggccgactgccatgatcgcctgcgcggcgtg
cgcatactgctggtggacgatgatcaggattcccgcgacgcggtcttgcactttctgcag
caagccggcgcacaggtgcaggctgcgggcacggtggacctggccgaacgtcacctggcc
gatgcctgcttcgatgtactagtcagcgatatcgccatgccgcaacgcgatggctacgac
ctgattcgcagcctgcgtggcggactggcgccgctgcatcggcatctgccagcgattgcg
ctcaccgcctatgtgcgcgacgaggaccgcgaccgggccgtgatcgccggtttcgatgcg
cacatgggcaagccggtggatccacccggcctggtggatctgatcgaacgcttgctggcc
accgggcgcgcgctgccggtgtag
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