Xanthomonas cucurbitae: EBN15_12050
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Entry
EBN15_12050 CDS
T06553
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
xcz
Xanthomonas cucurbitae
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcz03009
]
EBN15_12050
Enzymes [BR:
xcz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
EBN15_12050
Ribosome biogenesis [BR:
xcz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EBN15_12050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ABT1_C
Motif
Other DBs
NCBI-ProteinID:
QHG87567
LinkDB
All DBs
Position
complement(2793101..2793823)
Genome browser
AA seq
240 aa
AA seq
DB search
MTNRLNKHIADTGFCSRREADRLIGERRVTVNGVVAGTGAVVGEDDTVLVDGQPLRAREA
RKPGGRKHVYIALNKPVGVTCTTESSVKGNIVDFVGHEQRIFPIGRLDKDSEGLILMTSN
GNIVNEILRAENRHQKEYLVAVNKAVTDEFLRGMARGVRIHNETTLPCRTTRIAKFGFRI
VLEQGLNRQIRLMAAEFGYRVTQLRRVRIDNIKLAALKPGQWRNLNDAELRGLLPQRTDW
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccgactcaacaaacacatcgccgacaccggcttctgctcgcgtcgcgaggcc
gatcgcctgatcggcgaacgccgcgtcaccgtcaatggcgtggtggccggcaccggcgcg
gtggtgggggaagacgacaccgtgctggtggacggccagccgttgcgcgcgcgtgaggcc
aggaagcccggcggccgcaagcatgtctacatcgcgctcaacaaaccggtgggcgtgacc
tgcaccaccgagagttcggtcaagggcaacatcgtcgacttcgtcggccacgagcagcgc
atcttcccgatcggccggctggacaaggattccgaaggcctgatcctgatgaccagcaac
ggcaacatcgtcaacgagatcctgcgcgcagagaaccgccaccagaaggaatacctggtg
gcggtcaacaaagccgtcaccgacgaattcctgcgcggcatggcgcgcggcgtgcgcatc
cacaacgagaccaccttgccgtgccgcaccacgcgcattgccaagttcggtttccgcatc
gtgctggagcagggcctgaaccggcagattcgcctgatggccgccgagttcggctaccgg
gtgacgcaactacgccgcgtgcgcatcgacaacatcaagctggccgcgctcaagccgggg
caatggcgcaacctcaatgacgccgagctgcgcgggctgctgccgcagcgcaccgactgg
tga
DBGET
integrated database retrieval system
