Xanthomonas cucurbitae: EBN15_12090
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Entry
EBN15_12090 CDS
T06553
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EBN15_12090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcz03000
]
EBN15_12090
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_12090
Enzymes [BR:
xcz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
EBN15_12090
Transcription factors [BR:
xcz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EBN15_12090
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EBN15_12090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QHG87572
LinkDB
All DBs
Position
2802288..2803751
Genome browser
AA seq
487 aa
AA seq
DB search
MQTLTPDRTQCDRARLARDARFDGLFFTAVRSTGIYCRPVCPAPAPKPANVSYYPTAAAA
SAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIAEGVLQEQPVQRLADAVGVSARQLQ
RQFVQHLGATPIQVHGTRRLLLAKQLLTETALPVTEVALAAGFNSLRRFNAAFLEGCGMP
PSALRKQRAEVPGGELTLRLSYRPPLDWPAMLAFLQRRAILGIEQVDGGRYRRVIGPPGH
ASLIEVAPAPQRAELLLRIGATDPRRIPQIVRRVRRVFDLDADLHAVHATLAAEPLLAEA
IERRPGLRVPGGWDGFETAVRAVLGQQISVAGAATLAARLVERHGGRHAEMPPGLDRSFP
TPEQLAEAPLEQLGLPGARAATLRALAVACAQGRLHFGAGQRLSEFVAACVALPGIGPWT
AHYIAMRALSHPDAFPAGDLILQQVLGAPLRLSERATEARSQAWRPWRAYAVLHLWHLAA
DRKESRP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgctcacgcccgaccggacccaatgcgaccgcgcccgcctggcgcgcgatgcg
cgctttgacgggctgttcttcaccgccgtgcgcagcaccgggatctattgccgtccggtg
tgcccggcgccggcgccgaagccggccaacgtcagttattaccccacggctgcggcggcc
agcgcggccggctatcggccgtgcctgcgctgccggccggagctgtcgccgcaggcgcag
cagcacctgggcgaagagagcgtgcaacgcgccctggcgatgatcgccgaaggcgtgctg
caggagcagccggtgcagcgcctggccgatgcggtgggcgttagcgcgcggcagttgcaa
cggcagttcgtgcaacaccttggcgccacgccgatccaggtgcacggcacgcgtcggctg
ctgctggccaagcaattgctcaccgaaaccgccttgccggtgaccgaagttgcgctggcg
gccggcttcaacagcctgcgtcggttcaatgcggcgttcctggaaggctgcgggatgccg
ccgtcggcgttgcgcaagcagcgcgccgaggtgccgggcggcgaactcacgctgcgcctg
agctatcgcccccccctggactggccggcgatgctggcatttctgcagcgccgggcgatc
ctggggatcgagcaggtcgatggcggccgctatcggcgggtgatcggcccgcccggccac
gccagcttgatcgaggtcgcgccggcgccgcagcgcgcagaactgctgctgcgcatcggc
gccaccgacccgcgccggattccgcagatcgtgcgccgggtgcgccgcgtgttcgatctg
gatgcggacctgcatgcggtgcacgccacgcttgcggccgagccgctgctggccgaggcg
atcgaacgccggcccggcctgcgcgtgcccggcggctgggatggcttcgagaccgcggta
cgtgcggtgctgggtcagcagatcagcgtagccggcgcggccacgctggcggcgcggctg
gtggagcggcatggcggccggcatgccgagatgccgccagggctggatcgcagttttccc
acacctgagcaactggccgaggcgccgctggaacagctcgggctgccgggcgcacgcgcc
gccacgctgcgcgcactggccgtggcctgcgcgcagggccggctgcacttcggcgccggc
cagcgtctgtccgagttcgtcgccgcctgcgtcgccctgcccggtatcgggccgtggacg
gcgcactacatcgccatgcgtgcgctctcgcatccggacgcgtttccggccggcgacctg
atcctgcaacaggtgctcggcgcgccgctgcggctgagcgagcgcgccaccgaggcgcgc
tcgcaggcctggcgcccgtggcgcgcctacgccgtgctgcacctgtggcatctcgccgcc
gaccgcaaggaatcccgtccatga
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