Xanthomonas cucurbitae: EBN15_12850 Help Entry EBN15_12850       CDS       T06553                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism xcz  Xanthomonas cucurbitae Pathway xcz02020   Two-component system xcz02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:xcz00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     EBN15_12850  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     EBN15_12850  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:xcz03021]     EBN15_12850 Transcription machinery [BR:xcz03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      EBN15_12850 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_AsnC-type HTH_Crp_2 HTH_IclR HTH_23 Sigma70_r4 Sigma70_r4_2 HTH_11 HTH_Tnp_ISL3 HTH_28 MarR HTH_36 Motif Other DBs NCBI-ProteinID:  QHG87694 UniProt:  A0A6P1L7B0 LinkDB All DBs Position 2944579..2946015 Genome browser AA seq 478 aa AA seqDB search MKARLQTSLGQQLVMTPQLRQAIKLLQMSSTELELELAEAVETNPLLEWADEAAHAASQA PAESASSSSDDTRHEDAAPAERDDDWSQDELQWTGSGSGGSFDDDDSGDAVERVADSETL ADHLLWQLHLSPLSPRDRQIGATLIDALDEDGYLREPLSTILETLALGAAVDEAEVLTVL HQIQRFDPVGVGARTLGECLALQLAVLDPATPGRALALQIVAGPLERLPRSGVAGLAHEL KRPAADVEQAVHLVRSLDPRPGKQIGELSQDTYVVPDCVIWRQRGVWRASLAGRSQPKVT IHRGYENLIRSCGESDAGYLRGQLQEARWLLKSLEARGETLLRVVRCLLQHQAGFLEFGA QALRPLTLREIAGELGLHESTISRAIARKYVRTPRGTIALRSFFASGIDTDSGGEASSTA IQAMIRRLIEAENPRKPLSDAKLAELLKTSGVPVARRTVAKYREAMNISASHERVRIA NT seq 1437 nt NT seq  +upstreamnt  +downstreamnt atgaaagccaggctccagacatcgctaggacagcagttggtcatgacgccgcaattgcgt caggcgatcaagctattgcagatgtccagcaccgagctggagctggaactggccgaagcg gtggagaccaacccgctgctggagtgggccgacgaagccgcgcacgcggccagccaggcg ccggccgaatccgcatcgtcctccagcgacgatacccggcacgaagacgccgcccctgcc gaacgcgacgacgactggtcgcaggacgagctgcaatggacaggttcgggaagcggcggc agcttcgacgacgacgactccggcgatgccgtcgaacgcgtggccgactccgagacactg gccgaccatctgctctggcaacttcacctgtcgccgctgtcgccgcgcgaccgccagatc ggcgcgaccctgatcgacgcgctggacgaggacggctacctgcgcgaaccgctatcgacc atcctcgagaccctggcactgggcgcggcggtcgatgaggccgaagtcctcaccgtgctg caccagatccagcgcttcgacccggtcggcgtgggcgcccgcaccctgggcgagtgcctg gcattgcagctggcggtgctcgacccggccaccccgggccgcgcgctggcgctgcagatc gtggccggcccgctggaacggctgccgcgcagcggcgtggccggcctggcgcacgagctc aagcgcccggctgccgacgtggaacaggcggtgcacctggtgcgctcgctggacccacgc ccgggcaagcagatcggcgagctatcccaggacacctatgtggtgcccgactgcgtgatc tggcgccagcgtggagtctggcgcgcatcgctggccggccgctcgcagcccaaggtcacc attcaccgcggttacgagaacctgatccgcagctgtggcgagtccgacgccggctatctg cgcggccaactgcaggaagcgcgctggctgctcaagagcctggaggcgcgcggcgagacc ttgttacgggtggtgcgctgcctgctgcagcaccaggccggattcctggaattcggtgca caggcactgcggccattgaccctgcgcgagatcgccggcgaactcggcctgcatgaatcg accatttcccgcgccattgcccgcaaatacgtgcgcaccccgcgcggcaccatcgcgttg cgctcgttcttcgcctccggcatcgacaccgacagcggcggcgaagcctccagcacggcc atccaggccatgatccggcgcctgatcgaggcggaaaacccgcgcaaaccgctatctgac gccaagctggccgagctgttgaagacttccggcgtaccagtggcgcggcgcaccgttgcg aagtatcgtgaggccatgaacatttccgcctcccacgaacgcgtgcgcatcgcctga

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