Xanthomonas cucurbitae: EBN15_13705
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Entry
EBN15_13705 CDS
T06553
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBN15_13705 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcz03019
]
EBN15_13705 (recQ)
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_13705 (recQ)
Enzymes [BR:
xcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EBN15_13705 (recQ)
Messenger RNA biogenesis [BR:
xcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EBN15_13705 (recQ)
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EBN15_13705 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHG87832
LinkDB
All DBs
Position
3156037..3157839
Genome browser
AA seq
600 aa
AA seq
DB search
MSSPAHELLSRVFGYDAFRGPQQAIVEHVAAGNDALVLMPTGGGKSLCYQVPALLRDGIG
IVVSPLIALMQDQVEALRQLGVRAEFLNSTLDAENAQRVERALLSGDLDLLYVAPERLLT
PRFLSLLERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHIPRMALTATADPPT
QREIAERLDLVEARHFVSSFDRPNIRYTVVQKDNARKQLQEFLGRHRGCAGIVYAMSRRK
VEETAQQLCAQGFNALPYHAGLPAEVRAENQRRFLREDGIIMAATIAFGMGIDKPDVRFV
AHVDLPKSLEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQGEAAEERKRLERAK
LDHLLGYCESMQCRRQVLLAGFGETYPKPCGNCDNCLTPAAAWDATVAAQKALSCVYRSG
QRFGVGHLMDILRGSENERIKQLGHHQLSTYGIGRDLDERTWRSVFRQLVAASLLEVDSE
GHGGLRLTDASRQVLKGERQVMMRRENPSAGRERERSTQRTGLPVQPQDLLLFNALRGLR
AELAKEQNVPAFVIFHDSTLRNIAEQRPTSIDALSRVGGIGGGKLARYGAQLIEIVREQG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccccgcacacgaactgctcagccgcgtctttggctacgacgccttccgcggc
ccgcagcaggccattgtcgaacacgtcgccgccggcaacgacgcgctggtgctgatgcct
accggcggcggcaaatcgctgtgctaccaggtgccggcgctgctgcgcgatggcatcggc
atcgtggtctcgccactgattgcgctgatgcaggatcaggtcgaggcgttgcgccagctc
ggtgtacgcgccgaattcctcaactccaccctggatgcggaaaacgcacagcgggtagag
cgcgccctgctctccggcgacctggacctgctgtacgtggcgccggaacggctgctgaca
ccgcgcttcctgtcgttgctggagcgcagccgcatcgcgctgttcgccatcgacgaggcc
cactgcgtctcgcaatgggggcacgacttccgcccggaataccgccagctcaccgtactg
cacgagcgctggccacacatcccgcgcatggcgctgaccgccaccgccgacccgcccacc
cagcgcgagatcgccgagcgcctggacctagtggaggcgcgccacttcgtcagctccttc
gaccgccccaacatccgctacaccgtggtgcagaaggacaacgcgcgcaagcagttgcag
gagttcctgggccgccatcgcggctgcgccggcattgtctatgcgatgtcgcggcgcaag
gtcgaagaaaccgcccagcagctatgcgcgcaaggcttcaatgccctgccctaccacgcc
ggcctgccggcggaagtgcgcgccgagaaccagcgccgcttcctgcgcgaggacggcatc
atcatggccgccaccattgctttcggcatgggcatcgacaagcccgacgtgcgcttcgtg
gcgcacgtggacctgcccaaatcgctggagggctactaccaggaaaccggtcgcgccggc
cgcgatggcgaggcggccgaagcgtggctctgctacggtcttggcgacgtggtgctgctc
aagcagatgatcgaacagggcgaagcggccgaagagcgcaagcgcctggagcgcgccaag
ctcgatcacctgctcggctattgcgaatccatgcagtgccgccgccaggtgctgctggcc
ggcttcggcgagacctatcccaaaccctgcggcaattgcgacaactgcctcacaccggcc
gccgcctgggacgccaccgtggctgcgcagaaggcgctgagctgcgtgtatcgcagtggc
cagcgcttcggcgtgggccacctaatggacatcctgcgtggcagcgagaacgagcgcatc
aagcagctgggccaccaccagctgagcacctacggcatcggccgagatctggacgaacgc
acctggcgcagcgtgtttcgccagctggttgccgccagcctgctggaagtggacagcgaa
ggccacggcggcctgcgcctgaccgacgccagccgccaggtgctcaagggcgagcgccag
gtgatgatgcggcgcgaaaatccatccgccggccgtgagcgcgagcgcagtacccagcgc
accggcctgccagtgcagcctcaggatctgctgctgttcaatgccttgcgcggcttgcgc
gcggaactggccaaggagcagaacgtgccggccttcgtcatcttccacgacagcacgctg
cgcaatatcgccgaacaacgcccgaccagcatcgacgccctgtcgcgcgtaggcggcatc
ggtggcggcaagctggcccggtatggcgcgcagctgatcgagattgtccgcgaacaagga
taa
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