Xanthomonas cucurbitae: EBN15_13840
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Entry
EBN15_13840 CDS
T06553
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EBN15_13840 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xcz01007
]
EBN15_13840 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcz03016
]
EBN15_13840 (aspS)
03029 Mitochondrial biogenesis [BR:
xcz03029
]
EBN15_13840 (aspS)
Enzymes [BR:
xcz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
EBN15_13840 (aspS)
Amino acid related enzymes [BR:
xcz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EBN15_13840 (aspS)
Transfer RNA biogenesis [BR:
xcz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EBN15_13840 (aspS)
Prokaryotic type
Other AARSs
EBN15_13840 (aspS)
Mitochondrial biogenesis [BR:
xcz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EBN15_13840 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QHG87854
LinkDB
All DBs
Position
complement(3178713..3180512)
Genome browser
AA seq
599 aa
AA seq
DB search
MRTHFCGLVDATMIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPENAEVFPVA
ASLGYEDVLQVEGVVRARHAVNDKLRSGKVEVIATRITILNKAAPLPFHAHENPGEETRL
KYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGARDFLVPARM
HPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQLEFTQLDMEFAFVRER
DVQDFVEDMIRAIFKEVVDVELAAQFPRMTWAEAMRRYGSDKPDLRIALELVDVAELVKD
SEFAFFATAANDADGRVAALLIPGGASLSRKQIDDYATHAAKYGAKGLAWLKYGQTPDGA
QGGGSIESGFDISQVSGSVVKVLGPEKTVALLHAVKASPGDIVFFGAGTYNKVSDFMGAL
RLKAGKDFNLVADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTA
VSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGADEARAKFGFLLDALNYGAPPHG
GIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAAEQLAEVHVQVRPKQA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccacttctgcggcctggtcgatgcgaccatgatcggccaaaccgtcactctc
gccggctggaccgatgtggcccgcaatctgggcggggtgtgtttcatcgacctgcgcgac
cacgaaggcatcgtgcaggtgacggtggagccggagaacgccgaggtgttcccggtggcc
gccagcctgggctatgaagacgtgctgcaggtggaaggcgtggtgcgtgcgcggcatgcg
gtcaacgacaagctgcgctctggcaaggtggaagtgatcgccacgcgcatcaccatcctc
aacaaggctgcgccgttgccgtttcatgcgcacgaaaacccgggcgaagaaacccgcctg
aaataccgctaccttgacctgcgtcgcccggaaatgcagcgcatgcagcgcacccgcatc
aagctggtgcaggcgctgcgccggcatctggatgcgcgcgacttccaggacatcgaaacc
ccgatcctcaccaaggccaccccggaaggcgcacgtgacttcctggtgccggcacgcatg
catccgggagaattctacgcactgccgcagagcccgcagctgttcaagcagatcctgatg
gtggccggcttcgatcgctactaccagatcgcgcgctgtttccgcgacgaagcgctgcgc
gccgatcgccagctggaattcacccagctggacatggaatttgccttcgtgcgcgagcgc
gacgtgcaggatttcgtcgaagacatgatccgcgccatcttcaaggaagtggtggacgtc
gagctggccgcgcagttcccgcgcatgacctgggccgaggcgatgcgtcgctatggctcg
gacaagccggacctgcgtatcgcgctggaattggtcgatgtggccgagctggtgaaagac
agcgagttcgccttctttgccaccgctgccaacgatgccgacggacgtgtcgctgccctg
cttattccgggcggtgcaagcttgtcgcgcaagcagatcgacgactacgccacgcatgcc
gccaagtacggcgccaagggtttggcttggctcaagtatgggcagacaccggatggtgcg
cagggtggtgggtctatcgaaagtggctttgatatcagccaggtctcgggatctgtcgtc
aaggtactggggcctgaaaagacggttgctcttctccatgcggttaaagcatctcctggc
gacatcgtattttttggtgctggcacctacaacaaagtttcagacttcatgggcgcgctg
cgcctgaaggccggaaaggacttcaacctagtcgccgatggctgggcgccgctgtgggtc
accgatttcccgatgttcgaatgggacgacgaagcgcagcgctacgtcgctctgcatcac
cccttcaccgcaccagcggtggacgatatcgccgacctgcgcgccaatgcccgcaccgcg
gtgtcgcgtggctacgacatggtgctcaacggcaatgaaatcggtggcggctcgattcgt
atccatcgcccggacatgcagagcgcggtgtttgaactgctcggtatcggcgccgacgaa
gcgcgtgccaagttcggcttcctgctggacgcgttgaactacggcgccccgccgcacggc
ggcatcgccttcggcatcgaccggattgccgcgctgatggccggcaccgagtccatccgc
gacgtgatcccgttccccaagaccaccggcgcgcaggacctgatgaccgacgccccgtcg
ccaatcgccgccgagcaactggccgaggtgcacgtacaggtgcgccccaagcaggcctga
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