Xanthomonas cucurbitae: EBN15_14020
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Entry
EBN15_14020 CDS
T06553
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00300
Lysine biosynthesis
xcz00470
D-Amino acid metabolism
xcz01100
Metabolic pathways
xcz01110
Biosynthesis of secondary metabolites
xcz01120
Microbial metabolism in diverse environments
xcz01230
Biosynthesis of amino acids
Module
xcz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EBN15_14020
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EBN15_14020
Enzymes [BR:
xcz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EBN15_14020
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6401
NACHT_N
Motif
Other DBs
NCBI-ProteinID:
QHG87881
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All DBs
Position
3223567..3224763
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AA seq
398 aa
AA seq
DB search
MSLRIDTTAVMRALPRLRADSDGPLCAYVYDLAALDAHAAWMRAQLPGHCDLFYAAKANA
QAPILRTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGPGKLDSELAQATALPDCSMHV
ESIGELQRLDAIAAQADRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPQDMDAAMQL
LRISPSLRLQGFHFHLMSHQRDAGAQLQLIGAYLRTVQQWRQAYALGPLRVNAGGGFGVD
YLAPEASFDWAGFCAGLPGLLREHGSELRLRLEPGRYVSASCGWYLMEVLDIKRSHGQWF
AIARGGTHHFRTPAAQAHDHPFRVLRGPRAPVISDTPVTLVGQLCTPKDVLARQQPVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLPVDG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcatcgacaccactgcggtgatgcgcgcattgccacggctgcgtgccgac
agcgacggcccgctgtgcgcctatgtctacgatctggccgctctggacgcgcacgccgcc
tggatgcgcgcgcaactgcctggccactgcgacctgttctacgcggccaaggccaatgcg
caggcgcccatcctgcgcacgctcgccgcgcatgtggatggcttcgaagccgcctccggt
ggcgaactggcctggttgcacgcgcagcaaccgcaggcgccattgctgttcggcgggcca
ggtaaactggacagcgagctggcccaggccactgccctgcccgactgcagcatgcatgtg
gaaagcatcggcgaactgcagcgcctggacgccatcgcggcgcaggccgaccgctgcgtg
ccggtgttcctgcgcatgaatatcgccgtgcctggggcgcagagcacgcggctgatgatg
ggcggccagccctcgccattcggcctggacccgcaggatatggatgcggccatgcagctg
ttgcgcatcagcccgtcgctgcggttgcagggcttccatttccacctgatgtcgcaccag
cgcgatgccggtgcgcagctgcagttgatcggcgcctatctgcgcaccgtgcagcagtgg
cgacaggcctacgcgctcgggccgttgcgggtgaacgccggcggtgggttcggcgtggac
tacctggcgccggaggcctcgttcgactgggccggcttctgcgccgggttgccggggctg
ctgcgcgagcacggcagcgaactacgcctgcggctggaaccgggccgctatgtcagcgcc
agctgcggctggtacctgatggaagtgctggacatcaagcgcagccacggccagtggttc
gccattgcccgtggcggcacccaccatttccgcactccggccgcgcaggcccacgaccac
ccctttcgcgtgttgcgcggcccccgcgcaccagtcatcagcgacacgccggtgaccctg
gtcggccaactgtgcacgcccaaggacgtgctggcgcgccagcaaccggtggccgcgctc
gcccccggcgattgcctggccttcccgttggccggcgcctatgcgtggaatatttcgcac
cagcagttcctgatgcacccgccaccacagatggtgttcttgccggtcgatggctga
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