Xanthomonas cucurbitae: EBN15_15410
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Entry
EBN15_15410 CDS
T06553
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00730
Thiamine metabolism
xcz01100
Metabolic pathways
xcz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EBN15_15410 (thiC)
Enzymes [BR:
xcz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
EBN15_15410 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QHG88120
LinkDB
All DBs
Position
complement(3534234..3536111)
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AA seq
625 aa
AA seq
DB search
MNAAPTVLQQHAQSLSEAVTQPIPGSRKSFVQGSRPDLRVPMREIALTRTPTLFGGEDNP
PLSVYDTSGPYTDPQATIDLAAGLAPLRADWIAERGDTVALEQLSSSFGRGREQDARLDA
VRFAARRLPQVARAGANVTQMHYARRGIVTPEMEFVAIRENQRLEAVADAVLRQQHPGEQ
FGAAIQQRITPDFVREEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGSSAVSSGI
AEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRLTGIVSRGGSILAKWCLAHHKE
NFLYTHFEDICEIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTRLAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
EDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGMGEE
RALAAGMEEKAVQFLEQGAQVYRAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcgcccaccgttttgcagcagcacgcccaatccctgtccgaggccgtgacc
cagccgattcccggctcccgcaagagcttcgtgcagggctcgcgcccggacctgcgggtg
ccgatgcgcgagatcgcattgacccgcactccgaccctgttcggtggcgaagacaacccg
ccgctcagcgtctacgacacttccggcccctataccgacccgcaggcgacgatcgatctg
gccgccggcctggcgccgttgcgcgcggactggatcgccgaacgcggcgataccgttgca
ctggagcagctcagttccagcttcggacgcggtcgcgagcaggacgcgcggctggacgcg
gtgcgctttgccgcgcggcgcctgccgcaggttgcgcgcgctggggccaacgtcacccag
atgcattacgcgcgccgcggcatcgtcaccccggagatggagttcgtggccatccgcgaa
aaccagcggttggaggcggtcgccgatgcggtgctgcgtcagcagcatccgggcgagcag
ttcggcgccgcgatccagcagcgcatcacgccggatttcgtgcgcgaggagatcgcccgc
ggtcgcgcgatcctgcccaacaacatcaaccaccccgagagcgagccgatgattatcggc
cgcaatttcctgaccaagatcaacgccaacatcggcagcagcgcggtgtcttccggcatt
gccgaagaggtggaaaaactggtgtgggcgatccgctggggcggcgacacggtgatggat
ctgtccaccggcaagcatatccacgagacccgcgaatggatcatccgcaattcgccggtg
ccgatcggcacggtaccgatctaccaggcattggaaaaggtcgacggacgcgccgaagaa
ctcacctgggagatcttccgcgacaccttgatcgaacaggccgaacaaggcgtggactat
ttcaccatccatgccggcgtgttgctgcgctatgtgccgctgaccgccaagcgtctcacc
ggtatcgtgtcgcgcggcggttccatcctggccaaatggtgcctggcccatcacaaggaa
aatttcctctacacccacttcgaagacatctgcgagatcatgaaggcctatgacgtggcg
ttctcgctcggcgatggcttgcgtcctggctgcatcgccgatgccaacgatgcggcgcag
ttcggtgaactggagacgctgggcgagctgacccggcttgcctggaagcacgatgtgcaa
accatgatcgagggtccggggcatgtgccgatgcagctcatcaaggaaaacatggacaag
cagctgcgcgaatgcggggaggcaccgttctatacgctggggccgctgaccaccgatatc
gcgcccggctacgaccacatcaccagcgcgatcggcgcggccatgatcggctggtacggc
accgcgatgctgtgctacgtcacgcccaaggagcacctgggcctgcccaaccggcaggat
gtgcgcgacggcatcatggcctacaagatcgccgcgcatgccgccgatcttgccaagggc
catccaggtgcgcaggtgcgcgacaacgcactgagcaaggcgcgcttcgagttccgctgg
gaagaccagttccatctcggcctggatccggaaaaggccaaggagtttcatgacgaaacc
ctgccgaaggacgcccacaagctcgcgcatttttgttcgatgtgcggcccgcacttctgt
tcgatgaagatcacccaggacgtacgcgattacgcggccgaacacgggatgggtgaggag
cgggcactggcggccggcatggaagaaaaggcagtgcagttcctggagcagggggcgcag
gtctaccgcgcctcgtag
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