Xanthomonas cucurbitae: EBN15_16235
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Entry
EBN15_16235 CDS
T06553
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz00300
Lysine biosynthesis
xcz00470
D-Amino acid metabolism
xcz01100
Metabolic pathways
xcz01110
Biosynthesis of secondary metabolites
xcz01120
Microbial metabolism in diverse environments
xcz01230
Biosynthesis of amino acids
Module
xcz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EBN15_16235
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EBN15_16235
Enzymes [BR:
xcz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
EBN15_16235
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QHG88260
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Position
complement(3731870..3732721)
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AA seq
283 aa
AA seq
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MSADGRNGRLRFTKMHGAGNDFVVLDLRDGALPPDAALAARLADRHFGVGCDQILTIEAP
RSDGAVAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGDRFLIDSPVTAHAVERVDA
GIYAVAMGVPRFDPAQIPLAGFAHAREEYALPVHGETLRFGAVSMGNPHAVLEVGRVEAA
AVERVGSLLQQNAAFPDSVNVGFVQVVDPTQVQLRVFERGVGETLACGSGACAAAVVLMQ
RGRVERDVRVSLPGGALRIRWPGEGQDVVMSGPAVFVFDGEWI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacggccgcaacgggcgcctgcgtttcaccaaaatgcatggtgccggcaac
gatttcgtggtgctggacctgcgcgacggcgcgctgccgccggatgccgcgctggcggcc
cgcctggcggaccggcacttcggcgtgggctgcgatcagatcctgaccatcgaagccccg
cgcagcgatggcgccgtggctgcctatggcatctggaattccgatggttcggcggcccgc
cagtgcggcaacggcgcgcgctgcgtcgcggcctggctggtgcgcgatggcactgcgcaa
ggcgatcgcttcctcatcgacagcccggtcaccgcgcatgcggtggagcgggtcgatgca
ggcatctatgcggtggcgatgggcgtgccgcggttcgatccggcgcagattccgctggcc
ggctttgcgcatgcgcgcgaggaatacgcgttgccggtgcatggcgagacgctgcgcttt
ggcgcggtgtcgatgggcaacccgcacgccgtgctggaggttggccgcgtggaggccgcg
gcggtggaacgtgtcggcagcctgctgcagcagaacgccgcgttccccgattcggtcaac
gtcggttttgtccaggtagtggaccccacgcaggtgcagttgcgcgtgttcgagcgcggc
gtcggcgagacgctggcctgcggtagcggcgcctgcgcagcggcagtggtgctgatgcag
cgcggccgcgtggagcgcgacgtgcgtgtgtccctgccgggcggcgcgctgcggatccgc
tggcccggcgaggggcaggacgtggtgatgtccggtccggccgtgttcgtcttcgatgga
gaatggatctga
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