Xanthomonas cucurbitae: EBN15_16595
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Entry
EBN15_16595 CDS
T06553
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBN15_16595 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcz03019
]
EBN15_16595 (groL)
03110 Chaperones and folding catalysts [BR:
xcz03110
]
EBN15_16595 (groL)
03029 Mitochondrial biogenesis [BR:
xcz03029
]
EBN15_16595 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcz04147
]
EBN15_16595 (groL)
Enzymes [BR:
xcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EBN15_16595 (groL)
Messenger RNA biogenesis [BR:
xcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EBN15_16595 (groL)
Chaperones and folding catalysts [BR:
xcz03110
]
Heat shock proteins
HSP60 / Chaperonin
EBN15_16595 (groL)
Mitochondrial biogenesis [BR:
xcz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EBN15_16595 (groL)
Exosome [BR:
xcz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EBN15_16595 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EBN15_16595 (groL)
Exosomal proteins of breast cancer cells
EBN15_16595 (groL)
Exosomal proteins of colorectal cancer cells
EBN15_16595 (groL)
Exosomal proteins of bladder cancer cells
EBN15_16595 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
QHG88319
LinkDB
All DBs
Position
complement(3826761..3828401)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DQAVKAAVVELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLALEKATIKDLGRAKKVQVSKENTTIIDGAGDSATIESRVGQIKTQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALVAVGNLTGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGTGNYGYNA
ANGEFGDMVEFGILDPTKVTRSALQNAASIAGLMITTEAMVADAPKKDEPAMPAGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacattcgtttcggtgaagacgcacgtacccgcatggttcgtggcgtc
aacgtgcttgccaatgccgtgaaggccaccctgggcccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgcgccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggccgacaagttcgagaacatgggtgcgcagatggtcaaggaagtcgcttccaag
actaacgacaacgccggcgacggcaccaccaccgccaccgtgctggcccaggccctgatc
cgcgaaggcgccaaggccgtggccgccggcatgaacccgatggacctcaagcgcggtatc
gaccaggccgtcaaggccgccgtcgtcgagctgaagaacatctccaagcccaccaccgac
gacaaggcgattgcccaggtcggcaccatctcggccaactcggacgagtcgatcggcaac
atcattgccgaagcgatgcagaaggtcggcaaggaaggcgtcatcaccgttgaagaaggt
tcgggcctggaaaacgagctggacgtggtcgagggcatgcagttcgatcgcggctacctc
tccccgtacttcatcaacaaccagcagagccagtcggccgacctggacgacccgttcatc
ctgctgcacgacaagaagatctccaacgtgcgtgacctgctgcccgtgctggaaggcgtg
gccaaggccggcaagccgctgctgatcgtggctgaagaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgtggcatcgtcaaggtcgtggccgtcaaggcaccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtgggcctggcgctggaaaaggccaccatcaaggacctgggccgcgcc
aagaaggtgcaggtctccaaggaaaacaccaccatcatcgacggtgctggcgattcggcc
acgatcgagtcgcgcgtcggccagatcaagacccagatcgaagacacctcgtccgattac
gaccgtgaaaagctgcaggagcgcgtggccaagttggccggcggcgttgcagtcatcaag
gtcggcgcctcgaccgaaatcgaaatgaaggaaaagaaggcacgcgtcgaagacgccctg
cacgccacccgtgcagccgtcgaagaaggcgtggtcccgggcggcggcgtggccctggtg
cgtgcgctggtggccgtcggcaacctgaccggtgccaacgaagaccagacccacggcatc
cagatcgccctgcgcgccatggaagccccgctgcgcgaaatcgtggccaatgccggcgaa
gagccgtccgtgatcctgaacaaggtcaaggaaggcaccggcaactacggctacaacgcc
gccaacggcgagttcggcgacatggtcgaattcggcatcctggacccgaccaaggtcacc
cgttcggcgctgcagaacgcggcctcgatcgccggcctgatgataaccaccgaagcgatg
gtggccgatgcaccgaagaaggacgagccggcgatgccggccggtggcggcatgggcggc
atgggcggcatggatttctga
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