Xanthomonas cucurbitae: EBN15_16675
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Entry
EBN15_16675 CDS
T06553
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
xcz
Xanthomonas cucurbitae
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcz03000
]
EBN15_16675
03036 Chromosome and associated proteins [BR:
xcz03036
]
EBN15_16675
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_16675
Transcription factors [BR:
xcz03000
]
Prokaryotic type
Helix-turn-helix
Other families
EBN15_16675
Chromosome and associated proteins [BR:
xcz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
EBN15_16675
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EBN15_16675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Phage_NinH
HTH_29
BrkDBD
Xre-like-HTH
ZNHIT3_C
HTH_28
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QHG88334
LinkDB
All DBs
Position
3844743..3845015
Genome browser
AA seq
90 aa
AA seq
DB search
MNAASSRPDSSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYDIVLREMEIPLFVEVLN
HCEGNQSRAAAMLGIHRATLRKKLKEYGLT
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcagcctcctcccgtcctgacagcagtcgtggcgccccgaagtcgcccctgcgc
gaacacgtggcgcagtccgtgcgccgttacctgcgcgacctggatggcagcgacgccgac
gacgtctacgacatcgtgctgcgcgagatggagatcccgttgttcgtggaggtcctcaac
cactgcgaaggcaaccagagccgcgcggcggcgatgctgggcatccaccgcgcgacgttg
cgcaagaagctgaaagagtacgggctgacgtag
DBGET
integrated database retrieval system
