Xanthomonas cucurbitae: EBN15_18315
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Entry
EBN15_18315 CDS
T06553
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xcz
Xanthomonas cucurbitae
Pathway
xcz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EBN15_18315 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcz03400
]
EBN15_18315 (xth)
Enzymes [BR:
xcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EBN15_18315 (xth)
DNA repair and recombination proteins [BR:
xcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EBN15_18315 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QHG88610
LinkDB
All DBs
Position
complement(4207594..4208394)
Genome browser
AA seq
266 aa
AA seq
DB search
MRIISFNANGLRSAASKGFFDWFVAQDADVLCIQETKAQEHQLAGPQFLPAGYKAWFRDA
STKKGYSGVAIYARREPDEVRTALGWPEFDEEGRYIEARFGNLSVVSFYIPSGSSGELRQ
DYKFQVMRWLRPILEEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLN
GLCADAPSDASAADGRGWVDSYRVLHPQGQDYTWWSNRGAARANDVGWRIDYQLVTPGLR
EALQACAIYREQRFSDHAPYVVDYAL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatcagtttcaacgccaatggcctgcgatcggccgccagcaagggctttttc
gactggtttgtcgcccaggacgcggatgtgctgtgcatccaggagaccaaggcccaggag
caccagctggccgggccccaattcctgccggccggctacaaggcctggtttcgcgatgcc
agcaccaagaagggctacagcggcgtggcgatctacgcccggcgcgaacccgacgaggtg
cgcaccgcgctgggctggcccgagttcgacgaagaagggcgctacatcgaagcgcgtttc
ggcaacctcagcgtggtgtccttctatatcccgtccggctcgtcgggcgaattgcgccag
gactacaagttccaggtgatgcggtggctgcggccgatcctggaagaatggctggccagc
ggccgccagtacgtgctgtgcggcgactggaacatcgtgcgcaccgcgctggacatcaag
aactggaagtccaaccagaagaattccggctgcctgccgcccgagcgcgactggctcaac
ggcctgtgcgctgatgcgccaagcgatgccagcgccgccgacggccgcggctgggtcgac
agttaccgcgtgttgcatccgcagggccaggactacacctggtggagcaaccgcggcgcc
gcgcgcgccaatgacgtggggtggcgcatcgactatcaattggtcacccccggcttgcgc
gaggcattgcaggcctgcgcgatctaccgcgagcagcgcttctccgaccatgcaccgtat
gtcgtggattacgcgctgtga
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integrated database retrieval system
