Xanthomonas cucurbitae: EBN15_19120
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Entry
EBN15_19120 CDS
T06553
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
xcz
Xanthomonas cucurbitae
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xcz02022
]
EBN15_19120
Two-component system [BR:
xcz02022
]
NtrC family
Unclassified
EBN15_19120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_30
HTH_28
HTH_50
AAA_16
AAA
AAA_2
HTH_23
Phage_NinH
AAA_22
nSTAND3
FleQ
Motif
Other DBs
NCBI-ProteinID:
QHG88746
LinkDB
All DBs
Position
complement(4377237..4378577)
Genome browser
AA seq
446 aa
AA seq
DB search
MARILMIDDDAAFLATLQATLRSLGHEVVAASDGAQGLAQLRAGGIDLAFVDFRMPGMDG
IEVLRAHAADAAAPPVPLVMLTAHVSSSNTIEAMTLGAFDHLVKPVGRADIVAVVERALL
NGTNAAPAVALAVLPEEDDALVGHSPAMRTVHKRIGLAAASDLAVLITGETGTGKELAAR
ALHRASARAGAAFVAVNCAAIPLELMESELFGHRKGAFSGATSDRPGLIREADGGTLFLD
EIGDMPLPMQAKLLRFLQEGEVTPLGGRGAQKVDVRVLAATHRDLAAWVAAGQFRSDLRY
RLNVVPIELPPLRERGQDIVLLAQYFLRNGQGSARRLSAAAQARLLAYPWPGNVRELRNV
VQRCQVLVRGHSIEVDDLDEALGEAEPPRAAPIPPETSLPDAVARLEKQMIQEALAHSGG
NRAEAARRLGIHRQLLYRKLDDYGLQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatcctgatgatcgacgacgacgcagcattcctggccaccttgcaggcaacg
ctgcgctcgctcgggcacgaggtggttgccgccagcgacggtgcacaggggctggcgcag
ctgcgtgccggcggtatcgacctggcattcgtggactttcgcatgcccggcatggatggc
atcgaggtactgcgcgcgcacgccgccgatgccgcagcgccgccggtgccgctggtgatg
ctgaccgcgcacgtgtccagcagtaacaccatcgaggcgatgacgctgggcgcgttcgat
catctggtcaagccggtggggcgcgcggacatcgtcgcggtagtggagcgcgcgttgttg
aacggtaccaatgccgcacccgcagtcgcgttggcggtcttgcccgaggaagacgatgca
ctggtcgggcatagcccggcgatgcggacggtgcacaagcgcatcggcctggcggccgcc
tccgacctggcggtgctgataactggtgaaaccggcaccggcaaggagttggccgcgcgc
gcgctgcatcgtgccagtgcgcgtgcgggcgccgccttcgttgcggtcaactgcgcggcg
atcccgttggagctgatggaaagcgagttgttcggccatcgcaagggcgccttttccggt
gcaaccagcgaccgcccaggcctgattcgcgaagccgatggtggcaccttgttcctggac
gagatcggcgacatgccgctgccgatgcaggccaagctgctgcgcttcctgcaggagggc
gaagtgaccccattgggcgggcgcggcgctcagaaggtggatgtacgcgtgctggcggcg
acccatcgcgatctggcggcgtgggtcgctgcggggcagttccgcagcgacctgcgctac
cgcttgaacgtggtgccgatcgaattgccgccattgcgcgagcgtgggcaggacatcgtg
ctgctggcgcagtacttcctgcgcaacggacagggcagtgcgcgccggctgtcggctgcg
gcgcaggcgcgcctgctggcgtatccctggcccggcaacgtgcgtgaactgcgcaacgtg
gtgcagcgctgtcaggtgctggtgcgcgggcacagcatcgaggtggacgatctggacgag
gcactgggcgaggccgagccgccgcgcgccgcaccgattccgccggaaaccagcctgccc
gacgccgtggcgcggctggaaaaacagatgatccaggaggcattggcgcacagcgggggg
aatcgcgcggaggcggcacgtcggcttggcatccaccggcagctgttgtatcgcaagctg
gacgactacgggttgcagtaa
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