Xanthomonas cucurbitae: EBN15_19960
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Entry
EBN15_19960 CDS
T06553
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
xcz
Xanthomonas cucurbitae
Brite
KEGG Orthology (KO) [BR:
xcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcz03009
]
EBN15_19960
Enzymes [BR:
xcz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
EBN15_19960
Ribosome biogenesis [BR:
xcz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EBN15_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Methyltransf_31
Methyltransf_25
FtsJ
Cons_hypoth95
PrmA
Methyltransf_11
Methyltransf_23
MTS
Methyltransf_15
Methyltransf_12
TRM5-TYW2_MTfase
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_9
Spermine_synth
CMAS
AviRa
Motif
Other DBs
NCBI-ProteinID:
QHG88878
LinkDB
All DBs
Position
complement(4584869..4586035)
Genome browser
AA seq
388 aa
AA seq
DB search
MNTPVPVVRLKNAWRSSHPWIFQKLVEKPAAKPKPGTIVEVVGVDGEWIGRGFYNGHSRI
AVRILETDQTVPVDAGWFARKIAAAVSLRRDWLKLDGVSDAWRVVHSEGDGLSGLVVDRY
GDLVVVEFFAAGMFRHREWIYDALREQFPGCRFHSFADEHVQKQESFDFHGNTTTEAAVI
TEHGIKFRADPAGAHKTGFFADQRDNRQWLSEQVDGKTVLDLCCNTGGFAVYAAARGAAE
VLGVDIDEDVIAIAKGNAKLNNVRPRFVQADIFPWLRDAANRGEQFDVVILDPAKMTRDR
EQVIPALKKYLDMNKLALGVVKPGGLFATFSCTGLVAEQEFLDMLRRASYFSGRTIQILK
VAGAGPDHPFMAHVQESRYLKAVFCRVM
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatactcctgtccccgtcgtccgactcaagaatgcgtggcgctccagccacccgtgg
attttccagaagctggtggaaaagcccgccgccaagcccaaacccggcacgattgtcgag
gtggtcggcgtggatggcgagtggatcggccgcggcttctataacggacattcgcgcatt
gccgtgcgcatcctggaaaccgaccagacggtgccggtggatgcgggctggttcgcgcgc
aagattgccgctgcggtgagcctgcgccgcgactggctcaagctcgacggcgtctccgat
gcctggcgcgtggtgcatagcgaaggcgatggcctgtccggcctggtggtggaccgctat
ggcgacctggtggtggtggagttcttcgccgccggcatgttccgccaccgcgaatggatc
tacgacgcgctgcgcgaacagttcccgggctgccgcttccacagctttgccgacgaacat
gtgcaaaagcaggagagcttcgacttccacggcaacaccaccacggaagctgcggtcatc
accgagcacggcatcaagttccgcgccgacccggccggcgcacacaagaccggctttttc
gccgaccagcgcgacaaccgtcagtggctgagcgagcaggtggacggcaagaccgtgctg
gacctgtgctgcaacaccggcgggtttgcggtgtatgcggccgcgcgcggtgcggccgag
gtgctgggcgtggatatcgacgaggacgtcatcgccatagccaagggcaacgccaagctc
aataacgtgcggcccaggttcgtgcaggccgatatctttccgtggctgcgcgatgcggcc
aatcgcggcgaacagttcgatgtggtgatcctggatccggccaagatgacccgcgaccgc
gagcaggtgattccggcgctgaagaagtatctggacatgaacaaattggcgctgggcgtg
gtcaagccgggcggcctgtttgccaccttctcatgcaccgggctggtggccgagcaggag
tttctggacatgttgcggcgcgcctcgtatttctccgggcgcaccatccagatcctcaag
gtggccggcgctggccccgatcatccgttcatggcgcatgtgcaggagtcgcgttacctc
aaggcggtgttctgccgcgtgatgtag
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