KEGG   Xanthobacter dioxanivorans: EZH22_01195
Entry
EZH22_01195       CDS       T07733                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xdi  Xanthobacter dioxanivorans
Brite
KEGG Orthology (KO) [BR:xdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xdi03400]
    EZH22_01195
Enzymes [BR:xdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EZH22_01195
    5.6.2.6  RNA 3'-5' helicase
     EZH22_01195
DNA repair and recombination proteins [BR:xdi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EZH22_01195
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2
Other DBs
NCBI-ProteinID: QRG07098
UniProt: A0A974PPM6
LinkDB
Position
247546..250152
AA seq 868 aa
MAKAKRKGASPLPDPFDSWFRARGWTPRAHQLDLVAAANAGRSVLLIAPTGAGKTLAGFL
PTLIELREGRAKRAVRAKAAPAPAAAGDIPAPPVPFARWQAEPTASPLHTLYISPLKALA
VDIARNLETPIAEMELPIRVETRTGDTPSSRRQRQRRDPPDILLTTPEQISLLLASKDAE
HLFSGLKRVVLDELHALVTSKRGDLLSLALARLRAIAPGLQCVGLSATVAEPDDLRRYLV
PQDGTGPLADLVVTQGGAAPDISMLESRQKMPWASHTAQHAFGEIYALMAANKLSLAFVN
TRWQAEFLFQELWRINDLNLPIALHHGSLAVEQRRKVEAAMAAGKLKAVVATSSLDLGID
WGDVDLVINVGAPKGASRLMQRIGRANHRLDEPSRAVLVPANRFEVLECRAALEAVKAGA
QDTPPERQGALDVLAQHILGMACAAPFDAEALFAEVRSAAPYRALSRADFDAALDFVATG
GYALRAYERYAKIRRTKDGLWRVANPMIAQAYRLNVGTIVEASMLKVRLVSARGSPKTGV
AGRVRFGGRLLGEVEEYFVETMVPGDTFVFAGEILRYEVLVEDEVYVSRTTAKEPRVPAY
AGGKFPLSTFLAAGVRALLAAPERWSALPTQVRDWLELQRARSRLPGRDDLLVETFEQGN
RHYLVTYPFEGRLAHQTLGMLLTRRLERARLKPLGFVANDYALAVYAADDMGLAIRQGRL
SLADLFDEDMLGDDLEAWLAESALMKRTFRHCAVIAGLIERRFPGKEKTSRQVTVSTDLI
YDVLRRHQADHLLLRAARADAATGLLDVKRLAEMLARIKGRIVHQPLDHVSPLAVPVLLE
IGQESVGGEANDALLAEAEEDLVRAAMG
NT seq 2607 nt   +upstreamnt  +downstreamnt
gtggccaaggcaaagcgcaagggggcatcccctctccccgatccgttcgacagctggttc
cgtgcccgtggctggacgccccgggcgcaccagcttgatcttgtcgccgcggcgaacgcc
ggccggtcggtgctgctcatcgcccccaccggcgccggcaagacgctggccggcttcctg
ccgacgctgatcgagctgcgcgaggggcgggcgaagcgcgccgtccgtgccaaggcggct
cccgccccggccgcggccggcgacatccccgccccgccggtgcccttcgcccgctggcag
gcggagccgacggcctcgccgctgcacacgctctatatctctccgctgaaggcgctggcg
gtggacatcgcccgcaacctggagacgcccatcgccgagatggagctccccatccgcgtc
gagacccgcaccggcgacacgccgtcctcccggcgccagcggcagcggcgcgatccgccc
gacatcctcctgaccaccccggaacagatctccctgctcctcgcctccaaggacgccgag
catctcttctcggggctgaagcgggtggtgctggacgagttgcatgccctcgtcacctcc
aagcgcggcgacctgctctccctcgccctcgcgcggctcagggccatcgcgccgggcctg
caatgcgtggggctctccgccacggtcgccgagcccgacgacctgcgccgctacctggtg
ccgcaggatggcaccgggccgctggccgatctggtggtgacgcagggcggagcggcgccg
gacatctccatgctggagagccggcagaagatgccgtgggcgagccacaccgcccagcac
gccttcggcgagatctacgcgctgatggcggcgaacaagctgtcactggccttcgtcaac
acccgctggcaggcggaattcctgttccaggagctctggcgcatcaacgacctgaacctg
cccatcgccctccaccacggctcgctggccgtggagcagcggcgcaaggtggaggcggcc
atggcggcgggaaagctcaaggcggtggtggccacctcgtccctggacctcggcatcgat
tggggcgacgtcgacctcgtgatcaacgtgggcgcgcccaagggcgcctcgcgcctcatg
cagcgcatcggccgcgccaatcatcgcctcgacgagccctcccgcgccgtgctggtgccg
gccaaccgcttcgaggtgctggaatgccgcgcggcgctggaggcggtgaaggcgggtgcg
caggacaccccgcccgagcgccagggcgccctcgacgtgctggcccagcacatcctcggc
atggcctgcgccgcgcccttcgacgcggaggcgctgttcgccgaggtgcgctcggccgcg
ccctaccgcgccttgtcccgcgcggacttcgacgccgccctcgatttcgtcgccaccggc
ggctatgcgctcagggcctatgagcgctacgccaagatccgccgcaccaaggatggcttg
tggcgcgtcgccaaccccatgatcgcccaggcctaccggctgaacgtgggcaccatcgtg
gaagcctccatgctcaaagtccgcctcgtctcggcgcgcggatcgccgaagaccggggtg
gcgggacgcgtgcgcttcggcggccggctgctcggcgaggtggaggaatatttcgtcgag
accatggtgcccggcgacaccttcgtcttcgccggagagatcctgcgctacgaggtgctg
gtggaggacgaggtctatgtctcgcgcaccaccgccaaggagccgcgggtgccagcctac
gcggggggcaagttccccctctccaccttcctcgccgccggcgtgcgcgcgctcctcgcc
gcgccggagcgctggtccgccttgccgacgcaggtgcgcgactggctggagctgcagcgc
gcccgctcccgcctgccggggcgcgacgatttgctggtggagaccttcgagcaggggaat
cgccactacctcgtcacctacccattcgagggccgtctcgcccaccagacgctgggcatg
ctgctgacacggcgactggagcgggcgcggctgaagcccctgggcttcgtggccaatgat
tatgcgctcgccgtctatgcggccgacgacatgggcctcgccataagacagggccggctg
tctctggcggacctgttcgacgaggacatgctgggtgacgacctggaggcatggctggcg
gaaagcgccctgatgaagcggaccttccgccattgcgccgtcattgccgggctcatcgag
cggcgctttccgggcaaggagaagacctcgcggcaagtcaccgtctccaccgacctcatc
tacgacgtgctgcgccggcaccaggcggatcatctccttttgcgcgcggcgcgggcggat
gcggccaccggtctgctcgacgtgaagcggctcgccgagatgctggcgcgcatcaagggg
cgcatcgtccaccagcccctcgaccacgtatcgccgctggcggtgccggtgttgctggag
atcggccaggagagtgtgggtggcgaagcgaacgacgcgctcctggccgaagcggaagag
gatctggtgcgcgcggcgatggggtga

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