Xanthobacter dioxanivorans: EZH22_04310
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Entry
EZH22_04310 CDS
T07733
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xdi
Xanthobacter dioxanivorans
Brite
KEGG Orthology (KO) [BR:
xdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xdi03016
]
EZH22_04310
Enzymes [BR:
xdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EZH22_04310
Transfer RNA biogenesis [BR:
xdi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EZH22_04310
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QRG07626
UniProt:
A0A974PQJ8
LinkDB
All DBs
Position
895924..896544
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AA seq
206 aa
AA seq
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MTIRLHRGDLPADFVAAPVVAIDTETMGLNPFRDRLCLVQLSNGDGSADLVQIPQGADAR
SAPNLVRLLADPNVTKLFHFGRFDIAVLQHAFHVMPQPVWCSKIASRLVRTYTDRHGLKD
LLRELLNVDISKQQQSSDWGAADLSDAQLTYAASDVLHLHALKAKLEEMLAREGRTGLAA
ACFAFLPARAALDLSGWAEEDIFAHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgcaccgcggcgacctgcccgcggatttcgttgccgcgcccgtggtg
gcgatcgacaccgagaccatggggctgaaccccttccgcgaccgcctctgcctggtccag
ctgtccaacggcgacggcagcgccgacctcgtgcagatcccccagggggcggacgccagg
agcgcgccgaacctggtgcggctgctcgccgacccgaacgtgacgaagctgttccatttc
ggccgcttcgacatcgccgtgctgcagcacgccttccatgtgatgccgcagccggtctgg
tgctccaagatcgcctcgcgcctcgtgcgcacctacaccgaccggcacgggctgaaggac
ctcctgcgcgagctgctgaacgtggacatctccaagcagcagcaaagctcggactggggc
gccgcggacctctccgacgcccagctcacctatgccgcctccgacgtcctccacctgcac
gccctcaaggccaagctcgaggagatgctggcgcgggagggccgcaccgggctcgccgcg
gcctgcttcgccttcctgcccgcccgcgccgcgctcgacctgtccggctgggcggaagag
gacatcttcgcccacagctga
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