Xanthobacter dioxanivorans: EZH22_19925
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Entry
EZH22_19925 CDS
T07733
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xdi
Xanthobacter dioxanivorans
Pathway
xdi03030
DNA replication
xdi03430
Mismatch repair
xdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EZH22_19925 (dnaE)
03430 Mismatch repair
EZH22_19925 (dnaE)
03440 Homologous recombination
EZH22_19925 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xdi03032
]
EZH22_19925 (dnaE)
03400 DNA repair and recombination proteins [BR:
xdi03400
]
EZH22_19925 (dnaE)
Enzymes [BR:
xdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EZH22_19925 (dnaE)
DNA replication proteins [BR:
xdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EZH22_19925 (dnaE)
DNA repair and recombination proteins [BR:
xdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EZH22_19925 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QRG05340
UniProt:
A0A974PKN0
LinkDB
All DBs
Position
4284946..4288398
Genome browser
AA seq
1150 aa
AA seq
DB search
MSDPGFIHLHVHSSYSLLEGALSIGKLADLVKADAQPAIALTDTGNLFGALEFSEKMSGS
GIQPIAGVSLALDLPDPPGPRGAIRPKRPRIVLLAQSEPGWRNLMKLVSRAFLETASEDE
PRILVDWLAEASDGLIALTGGPAGPLDKALVSGHPELAAERLDLLASLFRDRLYVEVQRH
ETDAERLAEAGLLELAYAKGVPLVAANEPFFASQTDYEAHDALLCIAEGRLVAEGDRRRL
TAEHRFKTRKEMLELFADLPEATANTVEIARRCAYRVRTVKPILPRFTSGGGHGDPLAEE
AAELERQAREGLAQRLAKHGPAPGLDVKVYEERLAYELSVITKMKFPGYFLIVSDFIKWA
KAHDIPVGPGRGSGAGSLVAYSLQITDLDPLRFGLLFERFLNPDRVSMPDFDVDFCQERR
DEVIHYVQERYGRAQVAQIITFGTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPANPV
TLKQAIEDEPRLQATRDQEEVVKRAFDIAVRLEGLNRHASTHAAGIVIGDRQLHELVPLY
RDPKSDMPVTQYNMKWVEQAGLVKFDFLGLKTLTTIDKAVKLVHQRGIELDISKIPLDDP
KTYAMLGKGETVGVFQVESAGMRRALVDMKADRVEDLIALVALYRPGPMANIPVYCDCKH
GRAQPDYLHPMLEPYLKETFGVIIYQEQVMQIAQAMAGYSLGEADLLRRAMGKKIRAEME
KQRERFVSGAAGRGIEKAQADTIFDLLAKFADYGFNKSHAAAYALVAYQTAWLKANYPTE
FLAASMTLDMGNTDKLAEFRQEAQRLGIEVVPPNINLSAREFAVKDGKIIYAMAAIKGVG
GAAVEALVAARGERAFRDFSDFACRLPVKLVNKRTLESLMAAGCFDVLEKNRARAFAAID
SIVAEAQRVEANAQSGQNDMFGSGPSAAALPIPDVAPWLPSERLQREYDTIGFFLTGHPL
DDYADALKKMRVQAFSDFARAVRSGAAAGRLAATVVSKQERRTKSGTRMGIVGLSDPSGH
YEAVIFSEGLAHFRDLLEPGTPLLMMVAAELNGEDVRVRINSCERLDPVTARHQKGLRIF
LRSPEPIEGIARRLSDGKAGEAGSGDVSLILLMEDAKAEVEVSLPGKYPVSPQIAGAIKA
IPGVVAVEAA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcccggcttcatccacctgcacgtccattcctcctactcgctgctggagggg
gcgctttccatcggcaagctggccgacctggtgaaggcggacgcgcagccggccatcgcc
ctgaccgacaccggcaacctcttcggcgccctggaattctccgagaagatgtcgggctcg
ggcatccagcccatcgccggcgtctccctcgcgctcgatctgccggacccgcccgggccg
cgcggggcgatccggccgaagcggccgcgcatcgttctgctggcccagtcggagccgggc
tggcgcaacctgatgaagctggtgtcccgcgctttcctggagaccgccagcgaggacgag
ccgcgcatccttgtcgactggctcgccgaggcgagcgacggcctcatcgccctgaccggc
ggccccgccggccccctcgacaaggccctcgtcagcggccacccggagctggcggcggag
cggctcgacctgctcgcctcgctcttccgcgaccggctctacgtggaggtccagcgccat
gagaccgacgccgagcgcctcgcggaagccggcctgctcgaactcgcctatgcgaagggc
gtcccgctggtggccgccaacgagcccttcttcgccagccagaccgactatgaggcccac
gacgccctcctgtgcatcgccgaaggccgcctcgtggccgagggtgaccggcggcggctg
acggccgagcaccgcttcaagacccgcaaggagatgctggagctgttcgccgacctgccc
gaggccacggccaacacggtggagatcgcccggcgctgcgcctatcgggtgcggacggta
aagcccatcctgccgcgcttcacctccggcggcggccatggggaccccctggcggaggag
gcggcggagctggagcggcaggcgcgggagggtctcgcccagcgcctcgccaagcacggg
cccgcgccgggcctcgacgtcaaggtctacgaggagcggctcgcctacgagctctccgtg
atcaccaagatgaagttccccggctacttcctcatcgtgtcggacttcatcaagtgggcc
aaggcccatgacattccggtggggccggggcgcggctccggcgccggctcgctggtcgcc
tattcgctgcagatcaccgaccttgacccgctgcgcttcggcctgctgttcgagcgcttc
ctgaatccggaccgcgtgtccatgcccgacttcgacgtggacttctgccaggagcgccgc
gacgaggtgatccattacgtacaggagcgctacggccgggcgcaggtggcgcagatcatc
accttcggcacgctccaggcgcgcggcgtgctgcgcgacgtgggacgcgtgctggaaatg
ccctacgggcaggtggacaagctctgcaagctggtgccgcagaacccggccaatcccgtc
accctcaagcaggccatcgaggatgagccgcgcctccaggcgacccgcgaccaggaggag
gtggtcaagcgcgccttcgacatcgccgtgcgcctcgagggcctcaaccgccacgcttcc
acccatgcggcgggcatcgtgatcggcgaccgccagctccacgagctggtgccgctctat
cgcgatcccaagtccgacatgccggtcacccagtacaacatgaagtgggtggagcaggcg
gggctggtgaagttcgacttcctcggcctgaagacgctgaccaccatcgacaaggcggtg
aagctggtccaccagcgcggcatcgagctcgatatctccaagatccccctcgacgacccc
aagacctacgccatgctgggcaagggcgagacggtgggcgtgttccaggtggaaagcgcg
ggcatgcgccgcgcccttgtggacatgaaggccgaccgggtcgaggacctcatcgccctc
gtcgccctctaccggcccggccccatggccaacatcccggtctattgcgactgcaagcac
ggccgcgcccagcccgactatctccatcccatgctggagccgtacctgaaggagacgttc
ggcgtcatcatctaccaagaacaggtgatgcagatcgcccaggctatggcgggctactcg
ctgggcgaagccgaccttctgcgccgcgccatgggcaagaagatccgcgccgagatggag
aagcagcgcgagcgcttcgtctccggcgccgccgggcggggcatcgagaaggcgcaggcc
gacaccatcttcgacctgctggccaagttcgccgactacggcttcaacaagtcccacgcc
gccgcctatgccctcgtcgcctaccagacggcgtggctgaaggcgaattatcccaccgag
ttcctcgctgcttccatgaccctcgacatgggcaacacggacaagctcgcggaattccgg
caggaggcgcagcggctgggcatcgaggtggtgccgcccaacatcaacctgtccgcccgc
gagttcgcggtgaaggacggcaagatcatctacgccatggccgccatcaagggcgtgggc
ggcgcggcggtggaggccctggtggcggcgcgtggggagcgggcgttccgcgacttttcc
gatttcgcctgccgcctgccggtcaagctcgtcaacaagcgcacgctggagagcctgatg
gccgccggctgcttcgacgtcctggagaagaatcgcgcccgcgcgttcgccgccatcgat
tccatcgtggccgaggcgcagcgcgtggaggccaatgcccaatccggccagaacgacatg
ttcggctcgggtccctccgccgccgccctgcccattccggacgtggcgccctggctgccc
tccgagcgcttgcagcgagaatacgacaccatcggctttttcctcaccggccatccgctg
gacgattatgcggatgcgctgaagaagatgcgggtgcaggccttctccgatttcgcccgg
gccgtgcgctccggcgcggcggcggggcgcctcgcggcgacggtggtctcgaagcaggag
cggcgcaccaagtccggcacgcgcatgggcatcgtcggcctttccgacccctccggccac
tatgaggcggtgatcttctccgaaggcctcgcgcactttcgcgatctgctggagcccggc
acgccgctgctcatgatggtcgccgccgagctgaacggcgaggatgtgcgcgtgcgcatc
aattcgtgcgaacggctggacccggtcaccgcccgccaccagaaggggctgcgcatcttc
ctgcgctcgcccgagcccatcgagggcatcgcccgccgcctcagcgacggcaaggcgggg
gaggcgggctccggcgacgtgagcctcatcctgctgatggaggacgccaaggccgaggtg
gaggtgagcctgcccggcaaataccccgtttcgccgcagatcgccggtgccatcaaggcg
attcccggcgtcgtggcggttgaagccgcgtga
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