Xanthobacter dioxanivorans: EZH22_20550
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Entry
EZH22_20550 CDS
T07733
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
xdi
Xanthobacter dioxanivorans
Pathway
xdi00860
Porphyrin metabolism
xdi01100
Metabolic pathways
xdi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xdi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
EZH22_20550 (cobD)
Enzymes [BR:
xdi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
EZH22_20550 (cobD)
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Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
DUF6074
Motif
Other DBs
NCBI-ProteinID:
QRG05453
UniProt:
A0A974SIK7
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All DBs
Position
complement(4417535..4418506)
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AA seq
323 aa
AA seq
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MAFDVAALSMALEALLGYPAWLVRRIGHPVIWIGRLIVVLDHGLNRPGVSASGRRLLGIF
ALLVVLVGAAAPALALEWLLRPLPFGLVLIGLVGSTFIAQRSLHWHVARVAQALEVEGLD
AARAAVSHIVGRDPQTLDEAGVARAAIESLAENFSDGVVAPTLWMCVAGLAGGAAYKALN
TADSMIGHLTARHAAFGWASARTDDYVNLPASRLAGMLLIAAAAVTPGADARAARQAMLR
DAPRHRSPNAGWSEAAMAGALGLKLNGPKVYAGVLTEDAYMGNGRSEVTAADVRAALRLY
RRADAMLMLIVLAGAALPFIVPG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgacgtggcagcgctctccatggcgctggaggctctgctcggctatccggca
tggctggtgcggcgcatcggccatccggtgatctggatcggccgtctcatcgtcgtcctt
gaccatggcttgaaccggcccggcgtctccgcctccggacgtcgcctgctcggcattttc
gccctgctggtcgtgctggtcggggcggcagcccccgccctcgcccttgaatggctgctt
cgccccctgcccttcgggcttgttctcatcggcctcgtcggcagcaccttcatcgcccag
cgctccctgcactggcatgtggcgcgcgtcgcgcaggcgctcgaagttgaggggctcgat
gccgcgcgcgcggcggtgagccacatcgtggggcgcgatccccagacgctggacgaagcc
ggcgtcgcccgcgccgctatcgagagcctggcggagaacttctccgacggcgtggtcgcg
cccaccctctggatgtgcgtcgccgggctggctggaggcgcggcctacaaggcgctgaac
accgccgacagcatgatcggccacctcaccgcccggcacgccgccttcggctgggcctcg
gcccgcaccgatgactacgtgaacctgccggcctcgcgccttgccggcatgctgctcatc
gccgccgccgccgtgacgccgggagccgatgcgcgggcagcccggcaggccatgctgcgc
gatgccccgcgtcaccgttcgcccaatgcgggctggtcggaggcggccatggccggcgcg
ctgggcctgaagctgaacggaccgaaggtctatgccggcgtcctcaccgaggacgcctac
atgggcaacggacgcagcgaggtgaccgccgcggacgtgcgggccgccctccggctctat
cggcgggcggatgcaatgctgatgctcatcgtgctggccggcgccgccctgccgttcatc
gtgccaggctga
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