Xenorhabdus doucetiae: XDD1_0263
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Entry
XDD1_0263 CDS
T03784
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xdo03016
]
XDD1_0263 (trmA)
Enzymes [BR:
xdo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
XDD1_0263 (trmA)
Transfer RNA biogenesis [BR:
xdo03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
XDD1_0263 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_31
MTS
Methyltransf_11
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_12
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
CDG15974
UniProt:
A0A068QMR6
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All DBs
Position
complement(256804..257904)
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AA seq
366 aa
AA seq
DB search
MQNALPTENYENQLMEKAHRLKEMMLPFSAPEPEVFRSPASHYRMRAEFRIWHEEDDLYH
IMFDQQTKQRIRIDQFPVANPLINQMMQAIIAGVKDNPVLRHKLFQVDYLSTRSNKIIVS
LLYHKKLDEEWRERAMALRTQLIAAGFDLQLIGRAAKTKIMLDHDYIDEELPVAGKTMIY
RQVENSFTQPNASINIHMLEWAIDITKGSKGDLLELYCGNGNFSLALAQNFERVLATEIA
KPSVAAAQFNIAANQIDNVQIIRMSAEEFTQAMNGERAFNRLQGIDLSSYQCETIFVDPP
RSGLDEETVKMVQAYPRILYISCNPETLCQNLATLTQTHKVSKLALFDQFPYTHHMECGV
LLEKSA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgctttgccaacggaaaattatgaaaatcaattgatggaaaaagcccatcgc
ctaaaagaaatgatgctccccttcagcgcacctgagcctgaagttttccgttccccggca
tcccattacagaatgcgggcagaattccgtatctggcatgaggaagatgacctctaccac
atcatgtttgatcaacaaaccaaacaacgtatccgtattgatcaatttcccgttgccaat
ccgttaatcaatcaaatgatgcaggctatcattgcgggcgtaaaagataaccctgtattg
cgccataaattgtttcaggtggattatctttccacccgcagtaacaaaatcattgtctcc
ctgctttaccataaaaaactggatgaggaatggcgtgaacgtgccatggcactgcgtacc
caacttatcgcggcaggatttgatctccagcttattgggcgcgcggcaaaaaccaaaatc
atgcttgaccatgactatatagatgaagagttgccagttgcaggtaagaccatgatttac
cgtcaggttgaaaatagcttcacccagccgaatgccagcatcaatattcatatgttggaa
tgggcgattgacatcaccaaaggttcgaaaggcgacttgcttgagctgtattgcggcaat
ggtaatttttctctggcactggcacagaattttgagcgcgtcttggccactgaaattgcc
aaaccttcggtggctgccgctcaatttaatatcgcagcgaaccagattgataatgtgcag
attatccgcatgtcagcggaggaatttacccaggcaatgaacggagagcgagcgttcaat
cgcctacagggaattgatttaagcagttatcaatgtgaaaccatttttgttgacccacca
cgcagcgggctggatgaagaaacggtaaaaatggtgcaagcgtatccgcgcattctttat
atttcctgcaacccagaaacactctgccaaaatctggcaacactgacacaaacccacaaa
gtcagcaaactggcacttttcgaccaattcccttatacccaccatatggagtgcggtgtg
ttactggagaaaagcgcataa
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