Xenorhabdus doucetiae: XDD1_0372
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Entry
XDD1_0372 CDS
T03784
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03420
Nucleotide excision repair
xdo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XDD1_0372 (uvrD)
03430 Mismatch repair
XDD1_0372 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_0372 (uvrD)
Enzymes [BR:
xdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XDD1_0372 (uvrD)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XDD1_0372 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XDD1_0372 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDG16075
UniProt:
A0A068QQF7
LinkDB
All DBs
Position
352792..354957
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AA seq
721 aa
AA seq
DB search
MDVSYLLEGLNDKQREAVAAPRNNMLVLAGAGSGKTRVLVHRIAWLLSVENASPFSIMAV
TFTNKAAAEMRHRIENLIGTSQGGMWVGTFHSLAHRLLRAHHLDANLPQDFQILDSDDQH
RLIKRIIKAMNLDDKKWPARQGMWYINGKKDEGLRPQHIESYGNPVEATWLKIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPQILQHYRERFTNILVDEFQDTNSIQYAWVRLLAGES
GKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAGMLRLEQNYRSTSNILKAANALIAHN
SDRLGKNLWTEGSEGEPISLYCAFNELDESRYVVGRIKHWLEQGGALKECAILYRSNAQS
RVLEEALLQASLPYRIYGGQRFFERQEIKDALSYLRLVANRHDDTAFERVVNTPTRGIGD
RTLDVVRQVARDQQKTLWESSLLLIQEKVLAGRAASALQRFIELIEALETETQEMLLHVQ
TDRIIRDSGLWAMYQQEKGEKAQARIENLEELVTATRQFSYQDEDENLLPLPAFLSHAAL
ESGEGQADIYQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMSIDEGDRLEEERRLAY
VGVTRAMEKLTLTYAESRRLYGKEVYHRPSRFIGELPPECVAEVRLRATVSRPVSHKRLG
TPISANDSGYALGQRVRHPKFGEGTIVNIEGSGEHCRLQIAFQGEGIKWLVAAYARLETG
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcatatctgctcgaaggcctcaatgataaacaacgcgaagcggtcgcagca
ccccgtaataatatgctggtgctggcgggtgccggcagtggtaaaacgcgcgtgctggta
caccggatcgcctggttactgtcagttgaaaatgcctcgccattttccatcatggcggtc
acattcaccaataaagcggcggctgagatgcgccaccgcattgaaaacctgattggcacc
agtcaaggcggaatgtgggtcgggacattccatagccttgcccatcgcctgctgcgcgcc
catcaccttgatgcaaacctgccgcaagattttcagatcctggatagcgacgatcagcac
cgtctgattaaacgcatcatcaaagcgatgaatctggatgataaaaagtggccagcccgt
cagggaatgtggtacatcaatggcaaaaaagatgaaggcttgcgtccacaacacattgaa
agttacggcaatccggtagaagccacctggctgaaaatctatcaggcctatcaggaagcg
tgtgaccgtgccgggctggtggattttgccgaattattactacgcgcccatgaactctgg
ctgaacaagccgcagatcctgcaacattatcgtgaacgtttcaccaatattctggtggat
gaatttcaggataccaacagcattcaatacgcttgggttcgccttttggcgggcgaaagc
ggcaaagtcatgattgtcggtgacgatgaccagtccatttatggctggcgcggcgcgcag
gtagaaaacatccagcgtttcctcaaggattttccgggcgcgggcatgctccgtctggaa
cagaattaccgttcgaccagcaatatcctgaaagcggccaatgccctgattgcccataat
agcgaccgcttgggcaagaacctgtggacagaggggagcgagggcgagccgatttcactg
tattgcgccttcaatgaactggatgaatcccgttatgttgtcggccgtatcaagcactgg
ttagagcagggtggcgcactgaaagagtgtgcgatcctctatcgaagcaatgcccaatcc
cgcgtcttggaagaagccttgttgcaggcgtccctgccttaccgcatctatgggggccag
cgtttcttcgagcgtcaggaaatcaaagatgccttatcctacttgcgtttggtggcaaac
cgccacgatgacacggcgtttgagcgcgtggtgaatacaccgacgcgcggtattggtgac
agaacgctggatgtggtgcgccaagtggcgcgtgatcagcaaaaaaccttgtgggaaagc
agcttgctattgatacaggaaaaagtgctggctggccgtgcagcatccgcgttgcagcgc
tttattgaactcattgaagcactggaaaccgaaacgcaggaaatgttactgcatgtgcaa
accgatcgcattattcgtgattccggcttgtgggcgatgtatcaacaggaaaaaggcgaa
aaggcacaggcgcgcattgaaaaccttgaggaactggtgaccgcaacccgtcaattcagt
tatcaggatgaagatgaaaacctgctgccattgcccgccttcctttcccatgccgcgctt
gaatcgggggaaggtcaggcggatatctatcaggatgcggtgcaattgatgaccctgcat
tctgcgaaggggctggaatttccgcaagtctttattgtcggcgtggaagagggcatgttt
ccgagccagatgtccattgacgaaggggatcggctggaggaagagcgtcgcttggcctat
gtcggggtgaccagagcgatggaaaaactgacgctgacgtatgcggaaagccgtcgttta
tatggcaaagaagtgtatcatcgcccatcccgttttatcggcgaattgccgccggaatgc
gtggcagaagttcgcctgcgagcgaccgtttcccgtccggtcagccataaacggctgggc
acgcccatcagcgccaacgacagtggttacgcacttgggcagcgtgtacgccatcccaaa
tttggtgaagggacgattgtcaatatcgaaggcagtggtgaacattgccgcttgcaaatc
gcgtttcagggtgaaggcatcaaatggctggtggccgcttatgccagactcgaaacgggg
caataa
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