Xenorhabdus doucetiae: XDD1_0381
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Entry
XDD1_0381 CDS
T03784
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XDD1_0381 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xdo03019
]
XDD1_0381 (recQ)
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_0381 (recQ)
Enzymes [BR:
xdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XDD1_0381 (recQ)
Messenger RNA biogenesis [BR:
xdo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XDD1_0381 (recQ)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XDD1_0381 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SecA_DEAD
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
CDG16084
UniProt:
A0A068QMZ8
LinkDB
All DBs
Position
360191..362017
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AA seq
608 aa
AA seq
DB search
MSTAELISTASLAEQALRKTFGYQQFRPGQQQVIDAVLDGRDCLVIMPTGGGKSLCYQIP
ALVNNGLTLVVSPLISLMKDQVDQLRANGVEAECLNSTQSREQQFDIIQRCRKGSIKLLY
IAPERLVTDNFLDQLHDWQPVLLAVDEAHCISQWGHDFRREYRALGQLRRRFPGLPVIAL
TATADKTTRQDIVRLLELHEPIIHISSFDRPNIRYTLVEKYKPLDQLWSFVRGQQGKSGI
IYCNSRTKVEETAERLQKRGLSVAPYHAGLENNQRAWVQDAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLSAEAVLFYDPADMVWLRRCLEEKPASEQ
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGESRQTACGNCDICLDPPKRYDGLVEAQKAL
SCIYRVGQRFGIGYIVEMLRGANNQRIRDFGHDKLPVYGIGKTQSQEHWTSVLRQLIHLG
LISQNIANYSALQLTEAARPVLRGEVSLQLAVPRIQNLKSRNQQNKSYSGNYDRKLFAKL
RKLRKSIADDNNIPPFVVFNDVTLIEMAEQCPITPDELLLINGVGQRKLERFGEAFMALI
REHFEEFE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaccgcagaactcatcagcacggcatcgctggctgaacaagcattacgaaaaaca
ttcggataccagcaattccgaccagggcagcagcaggttatcgacgccgttcttgacggg
cgcgactgtttggtgattatgccaacgggaggcggtaaatcgctgtgttatcagatcccc
gcactggttaacaatgggctgacgttggttgtgtctccgttaatttcattgatgaaagat
caggtcgatcaactgcgcgcgaatggcgttgaagcggaatgtctgaactcaacccaaagt
cgtgaacagcaattcgatattattcaacgttgccgtaaagggagcattaaactgctctat
atcgcccctgaacggctggtcacggataactttcttgaccaactgcacgattggcagccc
gttttactggccgtcgatgaagcgcactgtatttctcaatgggggcatgattttcgccgg
gaataccgggcattagggcaacttcgccgccgcttccccggtctgcctgtgattgcactc
accgcgacggcagataaaacgacccgtcaggatatcgttcgcttattagagttacatgag
ccgattatccatatcagcagctttgatcgtcccaacattcgctacaccttagtggagaaa
tacaaaccccttgatcagctctggtcatttgtccgtggtcagcagggaaaaagtggcatt
atctactgcaatagtcgcactaaagtggaagagaccgcggagcgcctgcaaaaacggggg
ctgagtgttgccccttatcatgcggggctggaaaacaatcaacgtgcatgggtgcaggat
gccttccagcgagatgatttgcaggtcgttgtggcaacggttgcgtttggtatggggatc
aacaagccgaatgtgcgctttgttgtgcactttgatattccccgcaatatcgaatcttat
tatcaggaaacgggccgggccgggcgggatggcttatcggcggaagccgtgctgttttac
gatcctgcggatatggtgtggctgcgtcgttgcttggaagaaaaacccgcgagtgaacaa
caggacatcgaacggcacaaactcaatgcgatgggcgcatttgcagaggcacaaacttgc
cggcgcttagtcttgctgaattatttcggggaaagccgccaaacagcttgtggtaactgt
gatatttgtcttgatcctcccaagcgttatgacggtctggtggaggcacaaaaagcacta
tcctgtatttatcgcgttggacaacgttttgggattggctatattgtagaaatgctgcgt
ggtgcaaataatcaacgtattagagattttgggcacgacaagctgccggtttatggcatt
ggtaaaacacagagtcaggagcattggacgagtgtcttgcgtcagctcattcacttaggg
ctgattagccaaaatattgccaactactctgcgctacaactgacggaagctgcgcgacct
gtattacgcggcgaagtgtctctacaacttgctgtgccacgtatccaaaacctgaaaagc
cgcaatcaacaaaacaaatcatacagcggcaactatgatcgcaagttatttgccaaattg
cgcaaattgcgtaaatccattgctgatgacaacaatattcctccttttgtcgtttttaat
gacgtcacgttaattgagatggcagaacagtgcccaatcacaccggatgaacttttgctg
attaacggtgttgggcagcggaaattggagcgttttggtgaggcatttatggcattaatc
cgtgagcattttgaagaattcgagtaa
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