Xenorhabdus doucetiae: XDD1_0480
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Entry
XDD1_0480 CDS
T03784
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xdo03016
]
XDD1_0480 (truB)
Enzymes [BR:
xdo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XDD1_0480 (truB)
Transfer RNA biogenesis [BR:
xdo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XDD1_0480 (truB)
Prokaryotic type
XDD1_0480 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CDG16183
UniProt:
A0A068QMT8
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All DBs
Position
453625..454578
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AA seq
317 aa
AA seq
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MGRRRKGRAIHGVLLLDKPQEISSNDALQKVRRIFNASKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIARLGQRTDTSDSHGTLISEREVNITEPQLHAALDTFRGDTMQ
VPSMYSALKHQGKPLYEYARQGVNVEREARPITVYELQFIRWEGNELELEIHCSKGTYIR
TIIDDLGELLGCGAHVIYLRRLQVANYPHQRMVTLEQLQELKQQAEDQEIEAWELLDPLL
LPMDTAVTHFPVIHLTSVVASYFKQGQPVRSNHNLASNEWVRVTAGEENKFIGIAVIDED
GLVAPRRLVVETVVETE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggggcgccgtcgtaaaggccgtgcgatacacggtgtgctgttgctggataagccgcag
gaaatttcctccaatgatgcgttacagaaagtcaggcggattttcaatgccagcaaggcg
ggtcatacgggtgcgctggacccattagcaaccggcatgttgccgatttgccttggtgaa
gcgaccaaattttcccaatttttgctggattctgacaaacgctatcgtgtgattgcccgt
ttggggcagcgcacggatacgtcggattcacatggaaccctcatcagtgaacgtgaagtc
aacatcactgaacctcagcttcatgcggcattggatacattccgtggtgacactatgcag
gttccttccatgtattctgcattgaaacatcaggggaaaccgctatacgaatatgcccgt
cagggggttaacgttgagcgggaagcgcgtccgatcacggtttatgaattacaattcatt
cgctgggaagggaatgagctggaattggaaatacactgctccaagggcacttacattcgt
accatcattgatgatttaggggaattattgggctgcggcgcgcatgtcatttatctgcgt
cgtttacaggttgccaattatcctcaccaaagaatggtcacattggagcagttgcaggaa
ttaaaacaacaggctgaagatcaggaaattgaggcgtgggaattgcttgatcccttgttg
ctgcccatggataccgccgttacccattttcctgttatccacttaacttctgtggtcgcc
tcgtacttcaaacaaggccaacctgttcgaagtaaccataatttggcttcgaatgaatgg
gtgagggttaccgcaggagaggaaaataaattcatcggcattgccgtgattgatgaagat
ggattagtggcaccacgccggctggttgttgaaactgttgttgaaactgaatag
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