Xenorhabdus doucetiae: XDD1_0514
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Entry
XDD1_0514 CDS
T03784
Symbol
rnz
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xdo03016
]
XDD1_0514 (rnz)
Enzymes [BR:
xdo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
XDD1_0514 (rnz)
Transfer RNA biogenesis [BR:
xdo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
XDD1_0514 (rnz)
Prokaryotic type
XDD1_0514 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CDG16217
UniProt:
A0A068QMS4
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All DBs
Position
complement(489201..490118)
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AA seq
305 aa
AA seq
DB search
MELKFLGTSAGIPTKERNVTSLILDLQGIRNALWMFDCGEGTQHQILHSPVKIAKLEKIF
ITHLHGDHVFGLPGLLCSRSMGGSTDPLTLYGPTGIRQFVETALQLSSSFLTYPLEIIEI
QPGQLFDDGEFKVTAYALNHRVECYGYRIEEHDKPGALDAEKLNQDGIPRGPWMQTLKQG
GTVTLEDGRTICGKDYLGAPIRGKSLAIFGDTEPTPEALKLAANVDVMVHETTLEDAFAA
KANERGHSTTKQAATLARDANVKHFIATHISGRYGIEECPRLLAECREIFPHTDLAEDFA
VFVIK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaatttttaggtaccagcgcgggcattccgaccaaagagcgtaatgtcacc
agcctgatcctcgatttacagggcatccgcaacgcgctgtggatgtttgattgcggtgaa
ggaacgcaacaccagatcctgcattctcccgtcaaaatagccaaactggagaaaatcttt
atcactcacctgcatggtgatcatgtcttcggtttgcccggcctgttgtgcagccgttcg
atgggcggttctaccgatcccctcacgttatatggcccgaccggtatacgccagtttgtg
gaaaccgcgctgcaactgagcagctctttcctgacctacccgttggaaatcatcgaaatc
cagcccggacaactgtttgatgacggcgaattcaaggtcacggcttatgccttgaatcat
cgggtggaatgctacggttaccgtattgaagagcacgataaacccggcgcacttgatgcg
gaaaaattaaatcaggatggcattccccgcggcccgtggatgcagactttaaaacagggc
ggaacagtaacgctggaagatggccgcacaatttgtggcaaagattatttaggcgcgccg
atccgtggcaaatcactggctattttcggcgataccgaaccgacgccggaagccctgaaa
ctcgccgccaatgttgatgtgatggtgcatgaaaccaccctggaagatgcgtttgccgcg
aaagccaacgaacgtgggcattccacgacgaaacaggccgcaacactggcgcgtgatgcc
aacgtcaaacactttatcgcgacccatattagcggacgctatggtattgaagagtgtccg
cgattattggcggaatgccgggaaatatttccgcataccgatctggccgaagattttgct
gtatttgtgattaaataa
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