KEGG   Xenorhabdus doucetiae: XDD1_0577
Entry
XDD1_0577         CDS       T03784                                 
Name
(GenBank) VapC-like protein (VapBC toxin-antitoxin system)
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
xdo  Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:xdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xdo03016]
    XDD1_0577
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xdo02048]
    XDD1_0577
Transfer RNA biogenesis [BR:xdo03016]
 Prokaryotic type
  tRNA degradation factors
   XDD1_0577
Prokaryotic defense system [BR:xdo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    XDD1_0577
SSDB
Motif
Pfam: PIN DUF5615
Other DBs
NCBI-ProteinID: CDG16280
UniProt: A0A068QR47
LinkDB
Position
complement(544945..545334)
AA seq 129 aa
MYMLDTNIVSYIFRQHPTVIAKLRTVSPSEIGISSITEAELRYGLARRQNSTLEHIVNTF
IDSITVYDWDQNAAKVYGTLRAGMEKTGRTMGTMDQLIAAHALSRGLTLVTSDSAFGMVS
DLTIEDWTK
NT seq 390 nt   +upstreamnt  +downstreamnt
atgtacatgttggataccaatatcgtcagttacatttttcggcaacatccgacagtcata
gccaaattacgcaccgtatcaccctcagaaatagggatatcctccattactgaggccgag
ttgcgttatggcctggccagacgccaaaacagtacccttgagcatatcgtaaacacattt
attgattcgattacagtttacgattgggatcaaaatgcggcaaaagtctatgggacgtta
cgcgccggaatggaaaaaacgggcagaacaatgggaacaatggatcagttgattgccgct
cacgccctgagccggggattaactcttgttaccagcgattcagcgtttggaatggtgtct
gatttaactatcgaggactggacaaaatga

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