Xenorhabdus doucetiae: XDD1_0647
Help
Entry
XDD1_0647 CDS
T03784
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XDD1_0647 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xdo03019
]
XDD1_0647 (groL)
03110 Chaperones and folding catalysts [BR:
xdo03110
]
XDD1_0647 (groL)
03029 Mitochondrial biogenesis [BR:
xdo03029
]
XDD1_0647 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xdo04147
]
XDD1_0647 (groL)
Enzymes [BR:
xdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XDD1_0647 (groL)
Messenger RNA biogenesis [BR:
xdo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XDD1_0647 (groL)
Chaperones and folding catalysts [BR:
xdo03110
]
Heat shock proteins
HSP60 / Chaperonin
XDD1_0647 (groL)
Mitochondrial biogenesis [BR:
xdo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XDD1_0647 (groL)
Exosome [BR:
xdo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XDD1_0647 (groL)
Exosomal proteins of other body fluids (saliva and urine)
XDD1_0647 (groL)
Exosomal proteins of breast cancer cells
XDD1_0647 (groL)
Exosomal proteins of colorectal cancer cells
XDD1_0647 (groL)
Exosomal proteins of bladder cancer cells
XDD1_0647 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CDG16350
UniProt:
A0A068QRA1
LinkDB
All DBs
Position
611666..613312
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARSKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAHAIVTEGLKAVAAGMNPMDLKRGI
DKAVVAAVDELKKLSVPCSDSTAIAQVGTISANSDETVGKLIAQAMDKVGKEGVITVEEG
TGLEDELDVVEGMQFDRGYLSPYFINKPEAGSVELENPYILLVDKKISNIRELLPVLEGV
AKASKPLVIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTNGTV
ISEEIGLELEKATLEDLGQAKRIVINKDTTTIIDGVGEEGEIAARVTQIRQQIEESTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKRARVDDALHATRAAVEEGVVAGGGVALV
RVASAISSLTGDNEDQNVGIRVALRAMEAPMRQIVDNAGEEPSVVVNNVKAGKDNYGYNA
ATEQYGDMIDMGILDPTKVTRSALQFAASIAGLMITTEAMVTDLPKDDKADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtaatgatgctcgcagcaaaatgctacgcggtgtg
aatgtattggctgatgcagttaaagtgaccctgggtcctaaaggccgtaacgttgttttg
gataaatctttcggtgcgcctgtcatcactaaagacggcgtatctgtagcacgtgaaatc
gaattggaagacaaattcgaaaacatgggtgctcagatggttaaagaagtcgcctctaaa
gccaacgatgctgcgggcgatggtactacaacagcaactgtgctggctcacgctatcgtc
accgaaggtctgaaagctgttgctgccggcatgaacccaatggatctgaaacgcggtatc
gataaagctgtggttgccgcagttgacgagctgaaaaaactgtccgtaccttgctctgat
tccactgctattgcgcaggttggtactatctctgcaaactccgacgaaacagttggtaaa
ctgatcgcacaagcgatggacaaagtcggcaaagaaggcgtcatcaccgttgaagaaggg
actggcctggaagacgagctggatgttgttgaaggtatgcagttcgaccgtggttacctg
tctccttatttcatcaacaaaccagaagccggttctgttgaactggaaaatccatacatc
ctgttggttgacaagaaaatttctaacatccgtgaactgttgccagttctggaaggtgta
gctaaagcaagcaagcctttggttattattgcagaagatgttgaaggcgaagcgctggca
acgctggttgttaacaacatgcgtggtatcgtgaaagtggctgcggttaaagcaccgggc
ttcggtgatcgccgtaaagcgatgctgcaagatatcgcgactctgaccaacggtacggtt
atctctgaagagattggtctggagctggaaaaagcgacgctggaagatctgggtcaagca
aaacgtatcgttatcaacaaagacaccacaacgatcatcgatggcgttggtgaagagggt
gaaattgctgcacgtgtgactcaaatccgtcagcaaatcgaagaatcaacttctgactat
gaccgtgaaaaactgcaagagcgtgttgctaaactggcaggcggtgttgctgtcatcaaa
gtgggtgccgcaactgaagttgaaatgaaagaaaaacgcgcacgcgttgatgatgcactg
cacgcaacgcgtgcggcggtagaagaaggtgttgttgcgggtggtggtgttgctctggtt
cgtgttgccagcgctatttctagcctgacgggtgataacgaagatcagaacgtcggtatc
cgcgttgcactgcgtgcaatggaagcgccaatgcgtcagatcgtagacaacgccggtgaa
gagccatctgtggttgtcaacaacgtgaaagcgggtaaagacaactacggttataacgcg
gcaactgaacagtacggcgatatgatcgacatgggtatcctggacccaactaaagtcacc
cgttctgcactgcaattcgcagcttctatcgctggcctgatgatcaccactgaagcgatg
gtgactgacctgcctaaagatgacaaagctgacttaggcgcagccggtggtatgggcggc
atgggtggtatgggcggcatgatgtaa
DBGET
integrated database retrieval system
