Xenorhabdus doucetiae: XDD1_0661
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Entry
XDD1_0661 CDS
T03784
Symbol
ampH
Name
(GenBank) Penicillin-binding protein AmpH
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xdo01002
]
XDD1_0661 (ampH)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xdo01011
]
XDD1_0661 (ampH)
Enzymes [BR:
xdo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XDD1_0661 (ampH)
Peptidases and inhibitors [BR:
xdo01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
XDD1_0661 (ampH)
Peptidoglycan biosynthesis and degradation proteins [BR:
xdo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
XDD1_0661 (ampH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
CDG16364
UniProt:
A0A068QNN6
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All DBs
Position
625286..626464
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AA seq
392 aa
AA seq
DB search
MIWAISACADSGHLHQNKFQQSNAQSARWEVFEGNGKIKKMATALVDQYSQSIFDEGNPL
GMAIVVIDNNQVIHRSLGETYPGSGVRPRQDSLIRIASITKLMTSEIMIKLAQKKRLKIT
DPLQKYTYEGVHIPNYGTGQPIRLYHLASHTSGLPREQPGGKWGRPVFIWPTQSNRWNWL
KTAGINATPGTTAAYSNLAYDLLADALSKATGKPYPHLLQEEITRPYRMQDTTLTPTPSQ
CARLMAGVKSSPCVNTLAAAGSGGIYSTPADMQRWMQQFLSSHNQLRKQTASREQGIYFK
RADLTSITGMDVAGQADGIGLGWVYMDAKDDIPGIYQKTGGGGGFNTYIAMIPEQNIGVF
VVMTRKEKSQFSRVTSGVNELVAALARNHNQI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatatgggcgatttcagcttgtgcggattcgggtcatttacaccagaacaaatttcag
caatccaatgcgcaatctgcaaggtgggaagttttcgaggggaatggcaagatcaagaaa
atggcgactgcactggttgatcagtattcgcagtctatttttgatgaaggcaatcctttg
ggaatggcgatagtggttatcgataataatcaggtgatccatcgcagtcttggggaaacg
tatccggggagcggcgttcggccacggcaggattctttgattcgtattgcttcgattacc
aaattgatgaccagcgagatcatgattaagttggcccagaagaaacgccttaagattacc
gatccgttacagaaatacacttatgagggtgtccatatcccaaattacggcacaggtcag
ccaatccggctgtatcatctggcgagccataccagcgggttgccacgggagcaacctggc
ggaaagtggggacgccctgtctttatctggccgacgcaatcgaaccgctggaattggctg
aaaaccgcaggaatcaatgccacgcccggcacaaccgctgcgtattccaatctggcttac
gatttattggcggatgccctgtccaaagcaacgggaaagccctatccccacctgctgcaa
gaggagattacccgtccttatcgcatgcaagatacgactctgacgcccacgccatctcaa
tgcgcccgtttgatggcaggggtgaaatccagcccttgcgtcaatacccttgccgctgcg
ggcagtggcgggatttattcgactcccgcagatatgcagcgctggatgcagcaattttta
tcttcccataatcagttaaggaagcagacggccagccgtgaacaaggtatttactttaag
cgtgctgatctgacgtcaatcacaggaatggatgtggcgggccaagcggacggtatcggg
cttggttgggtctatatggatgctaaagacgatattccggggatttatcagaaaaccggc
ggcggcggtggcttcaatacttatatagcaatgatccctgagcagaatattggtgtattt
gtggtgatgacacgcaaagaaaaaagccaatttagccgtgtcacgagtggggtgaatgaa
ttagttgccgctttggcgcggaatcataaccagatttag
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