Xenorhabdus doucetiae: XDD1_0722
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Entry
XDD1_0722 CDS
T03784
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03030
DNA replication
xdo03430
Mismatch repair
xdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XDD1_0722 (holD)
03430 Mismatch repair
XDD1_0722 (holD)
03440 Homologous recombination
XDD1_0722 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xdo03032
]
XDD1_0722 (holD)
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_0722 (holD)
Enzymes [BR:
xdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XDD1_0722 (holD)
DNA replication proteins [BR:
xdo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XDD1_0722 (holD)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XDD1_0722 (holD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_III_psi
YOR097C_N
Motif
Other DBs
NCBI-ProteinID:
CDG16425
UniProt:
A0A068QRG8
LinkDB
All DBs
Position
682751..683161
Genome browser
AA seq
136 aa
AA seq
DB search
MTKRDRLLSQLGITQWVLRSPLALQGELSVLIPDSTRLLIISHDHIDLSHSLFADIFTAM
GIDASSVYCITTKDVELLSESIHCPSWLLGVDITLSIQGISLRSPALNDLSLDGNAKRAL
WQQIYHYEEYFSINSR
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcgtgacagattactctcccaactggggatcacccaatgggttttgcgtagc
cctttggcgttgcaaggtgaattatctgtcctcatccctgattcaacccgtctattgatc
attagccatgatcacattgacttaagtcattcattgtttgctgatatttttacagccatg
gggatcgatgcctcatcggtatattgcatcacgacaaaagatgttgagctactttcggaa
tcaatccactgtccaagctggctgttaggggttgatattaccttatcaatacaagggatt
tctttgagaagcccagcattaaatgacttatctcttgatgggaatgcaaaacgcgctctt
tggcaacaaatttaccattatgaagaatatttctctattaactcccgttga
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