Xenorhabdus doucetiae: XDD1_0821
Help
Entry
XDD1_0821 CDS
T03784
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_0821 (sbcC)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XDD1_0821 (sbcC)
Archaeal homologous recombinant proteins
XDD1_0821 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
cobW
AAA_21
ABC_tran
Rad50_zn_hook
nSTAND3
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CDG16524
UniProt:
A0A068QP08
LinkDB
All DBs
Position
complement(795881..799561)
Genome browser
AA seq
1226 aa
AA seq
DB search
MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTSLLDAICLALYHETPR
LNTISASQNELMTRHTAECLAEVEFEVKGVAYRAFWSQRRARNQANGKLQAPKGELALKK
EGKILADKIPEKKEKIAEITGLDFSRFTKSMLLSQGNFAAFLNAKDTDRADLLEELTGTE
IYGILSQEIYQRHKEAHSELNIHQAKASSIELLTPEQQHAYQNQQQQLVAEENQLSQQIK
ALQTAEQWLFRRDELQQSRASNASLLQQTEHAIQEAQPQLQQLAASEPAEKIRPLWDAQN
RAHHEKQWLTEQRTKIEHEHQQQLAMLQPAEQQLAQQEKIREEHQQYQYQQEKLISEQII
PLDHKIDVQSKEMMKLEKEIAGQDRDLTEISSQYQATQNQITALNNEQKALASYDEQHPY
YRNLDSKLPEWKQLFTRQQERQEKIDQLTQSTQQITSELTRTTDYLHTLHAELANQQAQS
QLLSNNLAAAENQLTTLQHKHPPEQLQKNLENYQKQLASQNQLAILLPQIQQLQTTISAD
QSQLTQSQALVKALPDQIAILNQQWADKQQHYDDLSHRIRLEQRIVSLEKERAQLKQGES
CPLCGSTHHPLISEYLNIALPHSEERLKILRQQLDQLQENRTTLQQKQQHQQQHGEQLQQ
NIAQCNAKLAEWVKQWQHHCQQLQVTELPIDAEAVNHFISQRQSAYHQHQMQQEALLQAE
KDHQAAEKALAANREQYQACEKRIELEKFKQDSAEKQRTEKTAEAQQLAAAYAATAQQLN
TELQPTPFTLPAHQEIENWLQQREQELKNYHDSREKWQKLLTEQAALQSKLSELDKQKNK
LTAQLHTLHEQQQQQKQLLAQTRQERHRLFGEQSTIAVRQVLQQKAHELEIAYKQAAFHL
QKMQNQLSQLTGAANEIEKSHTAAEANYKLAARHFQAGLEQQGFPDQFSFERALLEPEQR
EKLQQLQEKLEQQQWQAQTRHHESEVALQRHTETQPQLLNQYEPQQLSALLTDVTAKLKH
NNQQQGEVRTLLNSDATRRQQQQGLLAQIALLQQKYDDWSYLNNLIGSADGAKFRRFAQG
LTLDHLVHLANIRLEKLHGRYYLQRKDDGGLELQVVDIWQADAIRDTKTLSGGESFLVSL
ALALALSDLVSNKTQIESLFLDEGFGTLDAETLDIALDALDQLNASGKTIGVISHVDALK
ERIPVQIKVEKKNGLGCSQLAAEFRV
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcttacggctgaaaaatatcaattcattgcaaggcgaatggaaaatt
gactttacggcagaaccttttgccagcaatggattatttgccattaccggcccaacaggg
gcaggaaaaacctccttactggatgccatttgcctcgccctttatcatgaaacaccaagg
ctcaacaccatttctgcttctcaaaatgaattaatgacccgccataccgccgaatgcctt
gcggaagtagaatttgaagtcaaaggcgtcgcttatcgggcattttggagccagcgccgc
gcccgcaatcaggcaaatggcaagctccaagcaccaaaaggagaattggccctcaaaaaa
gagggaaaaatcttggcggataagatccctgagaaaaaagaaaaaattgccgaaataacc
gggctggattttagccgttttaccaaatccatgctgttgtcacaggggaattttgctgca
tttttaaatgcaaaggataccgatcgggcagatctactggaagagctaaccggcacagaa
atttacggcattctgtcccaggaaatttaccaacgccataaagaggcacactctgaactg
aatatccatcaggccaaagcctcttccattgaattactcacgccagaacagcaacacgca
tatcaaaaccaacaacaacagcttgtggctgaagaaaaccaactcagccaacaaataaag
gcattgcaaacggccgaacagtggctgtttcggcgagatgagctccagcaatcacgggca
agcaatgcttcacttttacaacagactgagcacgccattcaagaagcccaacctcaatta
caacaacttgccgccagcgaaccggcagagaaaatccgtccattatgggatgcacaaaac
cgggcacaccatgaaaaacagtggctcacggaacaacgcacaaaaatagagcatgaacac
caacaacaactggcaatgctgcaacctgccgaacagcaattggcacaacaggaaaaaata
cgggaagagcaccaacagtatcaatatcagcaagaaaagctcatctcagagcaaattata
ccgctcgatcataaaattgatgttcaatccaaagaaatgatgaaactcgaaaaagagatt
gccgggcaagaccgcgatctcacagagatttcatcccaataccaagccacacagaatcaa
ataacggctttaaataatgaacaaaaggcgttggcatcttacgatgagcagcatccttat
taccgcaatctggacagcaaactacctgaatggaaacagctattcactcgccagcaagag
cggcaagagaaaatagaccagctcacccaaagtacccaacaaattacctcggagctgacc
cgtacaacggactatctacatacactgcatgcagaattggctaaccaacaagcacagagc
caactactgagcaataaccttgccgcagcggaaaaccaactcacaacattgcagcacaaa
cacccgccggaacagttacagaaaaatttagagaattatcagaaacaactggcatcacaa
aaccaactggcgatcttacttccacagatccagcagttacaaacgacgatctcggccgat
caaagccaattgacacaatcccaagcattggtcaaagccttgcctgatcagatcgccatc
ctcaatcaacagtgggcagacaagcaacaacattatgacgatctcagccaccgaattcgc
ctggaacaacggatagtcagtctggaaaaagaacgagcacaattaaaacaaggtgaatct
tgcccgctttgcggttcaacgcatcatcctttaatcagcgaatacctgaatattgccctg
ccgcattcagaagagcgcttgaaaatcctgcgccaacagcttgatcaacttcaagaaaat
cgcacaaccctacagcaaaaacagcaacatcaacagcagcacggcgaacaattgcagcaa
aacattgcccaatgcaatgctaaattagcggaatgggtgaaacagtggcaacaccattgc
cagcagttgcaggtgacagaattacccatagatgcagaggcggttaatcattttatcagc
cagcgacaatcggcttatcaccaacatcaaatgcaacaggaagccctgttacaggcagaa
aaagaccatcaggcagccgaaaaagcattggctgccaaccgagagcaatatcaggcatgt
gaaaagcgtattgaactggaaaagttcaaacaggattcagccgaaaaacaacgaacagaa
aagacggcagaagctcaacaactcgcagccgcttacgcggcgacagcacaacagttaaac
acggaattacagccaacacctttcacccttcccgcccatcaggaaatagaaaactggctg
caacaacgtgagcaagaattaaaaaactaccatgattctcgtgaaaaatggcagaaactg
ctaacagaacaagccgccctgcaaagcaaactgagtgagttggacaagcaaaaaaataag
ctcaccgcccaacttcatactttgcatgaacaacaacagcagcaaaaacagttattggca
caaacacgccaggagcgtcatcgtttatttggtgaacaatccaccattgccgttcgtcag
gttttgcagcaaaaagcccatgaactggaaatcgcctacaaacaggccgctttccatctg
caaaaaatgcaaaaccaattgagccaattaaccggcgctgccaatgaaatagaaaaaagc
cataccgccgccgaagcaaactacaaacttgccgccagacacttccaagcaggcttagaa
cagcaaggctttcctgatcaattctcttttgaacgcgctttgctggaaccggaacaacgg
gaaaaattacaacagttacaagaaaaacttgaacaacaacaatggcaagcccaaacacgg
caccatgaatcagaagtcgccttacagcgacatacagaaacgcagccgcagttgcttaat
caatatgaacctcaacagttatccgccctattaaccgacgttaccgctaagttgaaacac
aacaaccagcaacaaggtgaagtcagaaccctgttaaacagcgatgccactcgccgtcag
caacaacaagggttattggcacagatcgcactgttacaacaaaaatatgatgactggagt
tacctcaacaatcttattggctctgccgatggcgctaaattccgccgttttgcccaaggt
ctgaccttggatcacctcgtgcatctggcaaatatccgattggaaaaattacatgggcgc
tattacttgcaacgcaaagatgacggcgggctggaattacaagtcgttgatatctggcaa
gcggatgcgatcagggataccaaaaccctttccggcggagaaagttttctggtcagcctc
gctcttgcgctcgccttgtctgatctcgtgagtaacaagacacaaatagagtccctgttc
cttgatgaaggctttggcacacttgatgccgaaacccttgatatcgccttggatgcactg
gatcagcttaatgcatcaggaaaaaccattggcgtcatcagccacgtagacgccttgaaa
gaacgcatccccgtgcagatcaaagtggaaaaaaagaatggcttgggatgcagtcaatta
gcagcagaatttcgggtttaa
DBGET
integrated database retrieval system
