Xenorhabdus doucetiae: XDD1_0822
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Entry
XDD1_0822 CDS
T03784
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_0822 (sbcD)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XDD1_0822 (sbcD)
Archaeal homologous recombinant proteins
XDD1_0822 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
CDG16525
UniProt:
A0A068QRQ8
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Position
complement(799579..800796)
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AA seq
405 aa
AA seq
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MRIIHTSDWHLGQYFFTKSRAAEHKHFLQWLIKKIVQHQVDALIIAGDIFDTGSPPSYAR
ELYNKFIVALQPTGCQLVILGGNHDSVATLNEAKSLLSYLNTTVIANAETEDIAQQIKIL
HNREGNAGAILCAIPYLRPRDILTSQPGQSGVQKQQALQDAISEHYHRLYQQACTLREQL
GQPLPIIATGHLTTVGASTTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQVIGKSE
HIRYSGSPIPLSFDEVEQEKSVCLVDFKSGKLDSITLLTIPHYQPMQLIRGNLQQIEAQL
QTFKEYQGERPVWLDIEVATQDYLHDIQKRVQTLSEGLPVEIILLRRSKSARQLSLSEQN
NETLAELSVNEVFERRLALAEIGDIAQKQRLTTLFKQTLDDISQQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcattcacacatctgactggcatcttggccaatacttctttacgaaaagccgc
gccgcggagcataagcactttttgcagtggctgattaaaaaaatcgtccagcatcaagtg
gatgccttgattattgccggtgatatctttgataccggttccccgcccagctatgcgcgt
gagctttataacaaattcattgtggcgctacagcccacaggctgccaacttgtcattctt
gggggaaaccatgattccgttgccacactcaacgaagcaaaatccctcctctcttacctg
aataccacggtgattgccaatgctgaaaccgaagatatcgcacaacagataaagatcctg
cataacagagaaggcaatgccggggcgatcctctgcgccattccctatctgcgcccacgg
gatatcttaaccagccagccggggcaatccggcgtacaaaaacagcaggcattacaggat
gccatcagcgaacactatcacaggctctatcagcaagcctgtacattacgagaacaactt
ggtcagccattaccgattattgccaccggtcacctcaccacagtaggggcttccacaaca
gattccgttcgcgatatttacatcggcacattagatgccttccctgctcaggcatttcct
cccgctgactatatcgcactggggcatatccaccgcccgcaagttatcggtaaatcagag
catatccgctacagcggttcccctattccactcagttttgatgaagtggaacaggagaaa
agtgtctgcctggtggattttaaatcaggcaaactcgatagcatcacactgttaacaatc
ccgcattatcagccgatgcagcttattcgtggtaatttgcagcaaatcgaagcgcagtta
caaacatttaaggaatatcagggagaacgccctgtttggctggacattgaagtcgcaacc
caagattatctgcacgatatccagaaacgcgttcagaccttaagtgaaggattgcccgtt
gagatcatcctgttacgccgcagtaaaagcgcccgccaactgtcactgtctgaacaaaat
aacgaaacccttgccgaattaagtgtcaatgaggtcttcgagcgtcgtttggcgctggca
gaaataggcgatattgctcagaaacaacgcctgaccaccctgtttaaacaaacgctggac
gatatttctcagcaataa
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