Xenorhabdus doucetiae: XDD1_1187
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Entry
XDD1_1187 CDS
T03784
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
xdo
Xenorhabdus doucetiae
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_1187 (dinB)
Enzymes [BR:
xdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XDD1_1187 (dinB)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
XDD1_1187 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
Cdd1
DNA_pol_lambd_f
HHH_5
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
CDG16890
UniProt:
A0A068QST3
LinkDB
All DBs
Position
1173610..1174665
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AA seq
351 aa
AA seq
DB search
MRKIIHIDMDCFFAAIEMRDNPSLRNIPIAVGGSADRRGVISTANYPARRFGVHSAMSTA
MALKLCPQLKVIPGRMALYKEVSQHIRQIFSRYTELIEPLSWDEAYLDVTNCRYCHGSAT
LIAQEIRQVIFDELQLTASAGVAPVRFLAKIASDINKPNGQYVISPEQVETFVNSLPLRK
IPGVGKVTAKRLSGMGLETCSDVQRYDKLALIKSLGKFGLVLWERCHGIDERQITPERLR
KSVGVEKTLAQDIYEWDECVELIEKLYPELERRLEKVKPDFRIARQGIKLKFDDFQLTTQ
EHVHPMLDKHDLIQVAKQAWETRRVGRGVRLVGLHVTLQNPQLERQLLLEW
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaattattcatattgatatggattgcttttttgctgccattgaaatgcgggat
aatccatcactccgcaacattccgattgcagtcggcggaagtgctgatcgaaggggggtc
attagtacggcaaattatcccgcccgccgttttggggtgcacagtgcgatgtccacggca
atggcattaaaactttgtcctcaattgaaagtcatccccggcaggatggcgctttataaa
gaagtctctcaacatatccgtcaaattttttcccgctacactgaattgatcgaaccgctt
tcctgggatgaagcctatctggatgtgacgaattgccgttattgccacggctccgccacg
ttgattgcccaggaaatccgtcaggtcatttttgatgaattgcagttaaccgcctctgcg
ggtgtggcaccggtcaggtttttagccaagatagcctctgatatcaataaacctaatggg
caatatgttatctcccccgaacaggtcgaaacttttgttaattcgctgccattacgcaaa
attcccggtgtcggcaaagtcacggcaaagcgcctgtcaggcatgggattagaaacctgc
tctgatgttcagcgatacgataagttggcgttaataaaaagcttgggtaagtttggtctg
gtgctttgggagcgctgccacggcattgatgagagacaaattacgcctgagcgcttgcgt
aaatctgtcggagtggaaaaaaccttggcgcaggatatttatgagtgggacgagtgtgtt
gaactgattgaaaaactttatcctgagctggaaagacggctggaaaaggtaaaacctgat
tttcgaattgcccgtcagggtatcaaattgaagtttgatgattttcaattgacgacacag
gagcacgtccatcctatgctggataaacacgatctgattcaggttgcaaaacaggcttgg
gaaacacgcagggtaggccggggagtcaggttggttgggctgcatgtgacattacaaaat
ccacaattggaacgtcagcttttattggaatggtaa
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