Xenorhabdus doucetiae: XDD1_1308
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Entry
XDD1_1308 CDS
T03784
Name
(GenBank) ABC transporter RTX toxin
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XDD1_1308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xdo02000
]
XDD1_1308
02044 Secretion system [BR:
xdo02044
]
XDD1_1308
Transporters [BR:
xdo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XDD1_1308
Secretion system [BR:
xdo02044
]
Type I secretion system
RTX toxin transporter
XDD1_1308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_22
AAA_21
AAA_18
AAA_29
PRK
Rad17
AAA_28
RsgA_GTPase
MeaB
CoaE
AAA_30
nSTAND3
AAA_25
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
CDG17007
UniProt:
A0A068QPM5
LinkDB
All DBs
Position
complement(1299652..1301826)
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AA seq
724 aa
AA seq
DB search
MAEMFSFTHSENFTPDTSGTNNRALDCIAYLGTQFHKVASVEQLHHVLGVDSLALTDPQL
REAADAIGLHSKFERLTPDTAATLPLPALIEWDQRWWVLSEIRPDTLTIFDPGSGKYAVR
ELVHPMPAEPTDHNGYNYKILLVADKSLTKQQVKFGLSWFYPSIFRQKNQLRDIFLFAIV
LQLFALASPLLFENIIDKVLVGRSLSSLHVLGMAMLALALAEPLYGFLRNTVFGHMASQI
NAELSGRLYRHLVGLPLPYFKQRQTGQVIARVREMAQIRQFLTGSTLMLLLDLIFIVLFL
GVMFHYSSLLTWIVISSLLLHFLLWVAVGPMIRRKVEKEYEADANATSFLTEAVTGIETI
KTTATEKRFLHQWQKVLSQQLIQRFTAQKSGLAAGQGIELIQKVVAALLLWWGVRSVLEG
ELSPGELIAFNMLAGHVTQPILRLAQVWQDFQHTLIALRRVGDILDEPMESSKQGLASAP
ELAGQIEFRNIRFRYHADTPEVLANLSLEIKAGEFIGITGPSGSGKSTLTRLLQRLYVPQ
HGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSIADNIRLCKPNASDEEVYRAATLA
GAVDFINAFPHQFAHPVGEKGCNLSGGQRQRIALARALLSDPKILILDEATSALDYESEA
AIMSNMDEICRNRTVISIAHRLNTLRHADKIFVLDQGKIAESGSHDALVQQDGLYAQLWH
QQTQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatgttctctttcacccacagcgaaaatttcacgcctgatacttctggtact
aacaaccgtgcactggattgcattgcctatttgggcacacagtttcacaaagtcgcgtct
gtcgaacaactgcatcatgttctgggggtggattcccttgcgctgaccgatccacagcta
cgtgaagcggcggatgccattgggttgcacagtaagtttgaacgcctgacacccgatacc
gccgctacgttaccgttaccggcattgattgaatgggatcagcgctggtgggtgctgtca
gaaatccgtcccgacacattgacgatattcgatcccggcagcggaaaatatgccgtccgt
gaattagttcatcccatgcccgctgaaccaacggatcacaacggatacaactataagata
ctactggtggcagataaatccctgaccaaacagcaggttaaatttggcctgagctggttt
tatccttccattttcaggcaaaaaaatcagttacgggatattttcctgtttgccatcgtg
ttgcagctttttgcactggcttccccgctattgtttgaaaatattatcgacaaggtgctg
gtcgggcggagtctttccagcctgcatgtgctgggcatggctatgctggcactggcgctg
gcggaaccgctgtacggcttcctgcgcaataccgtgtttgggcatatggccagccagatt
aatgctgaactctccggcaggctgtatcgccatctggtggggctgcccctgccctatttt
aagcaacggcaaaccgggcaagttatcgccagagtccgggaaatggcgcagatccgccag
ttcttgaccggctcgaccctgatgctgttgctcgacctgattttcatcgttctgtttctg
ggcgtgatgttccattattcctccctgctgacctggatcgtcatcagttcactgcttctc
cactttttgttatgggtagccgtcgggccaatgattcggcgcaaggtagaaaaagagtat
gaagcggatgccaatgccaccagctttctgaccgaagcggtcacggggattgaaactatt
aaaaccaccgcaaccgaaaaacgcttcttgcaccaatggcaaaaggtgttgagtcagcag
ttaatccaacgttttaccgcccaaaaaagcgggctggcagcgggacaagggattgaactg
atccaaaaagtggttgccgccctgctgctgtggtggggcgtccggagcgtgctggagggc
gagttatcccccggcgaattaattgcgtttaatatgctggcggggcatgttacccagcct
attttaaggctggcgcaagtctggcaagactttcaacataccctgatcgccctgcgccgg
gtgggggatattcttgatgagccaatggaaagcagtaaacaggggctggcctccgccccc
gaactggccggtcagattgagttcagaaatatccgtttccgctatcatgccgataccccc
gaagttctggcaaatctgtcactggaaattaaagccggggaatttattggcattaccggg
ccgtcgggttccggcaagagtaccctgacccgattgttgcagcgcctctatgtgccgcaa
cacggtcaggttttggtggatggcatggatttggcgattgctgaccccgtctcactgcgc
cgtaatatgagcgtggtcttgcaggagagcattctgttttccggcagcattgcggataat
atccgcctgtgcaaacccaatgccagtgatgaagaggtctatcgggcggcaaccctggcg
ggcgcagttgacttcattaatgcctttccccatcaatttgcccatccggttggcgaaaaa
ggatgcaatctttccggcgggcaacggcaacgtatcgcattggcaagggcattgctgagt
gatcccaaaattttgatccttgatgaagcgacttccgcgctggattatgaatctgaagcc
gccatcatgagcaatatggatgaaatctgccggaaccgcacggtgatcagcattgctcac
cggctcaataccctccgccatgcggataaaattttcgttttagatcaggggaaaatcgct
gaatccggttcacatgatgcgctggtgcaacaagatggcttatatgcacaactttggcat
caacaaacccagtga
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